Lactuca sativa (garden lettuce): 111916786
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Entry
111916786 CDS
T05352
Name
(RefSeq) uncharacterized protein LOC111916786
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase [EC:
2.8.4.5
]
Organism
lsv
Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lsv03016
]
111916786
Enzymes [BR:
lsv01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
111916786
Transfer RNA biogenesis [BR:
lsv03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
111916786
Prokaryotic type
Methylthiotransferases
111916786
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
Motif
Other DBs
NCBI-GeneID:
111916786
NCBI-ProteinID:
XP_023768214
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All DBs
Position
1:complement(14868998..14872823)
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AA seq
611 aa
AA seq
DB search
MEDIEDLLVGGGAAPPGFRLPITAAVGINPMKKKKNNKLEPSSLLQNSSTHQVPGTQTIF
LKTFGCSHNQSDSEYMAGQLSSFGYAISDNAEGADLWLINTCTVKSPSQSAMDTLISKCK
SAKKPLVVAGCVPQGSRDLKELEGVSIVGVQQIDRVVEVVEETLKGHEVRLLNRKTLPSL
DLPKVRKNKFVEILPINVGCLGACTYCKTKHARGHLGSYTVDSLVGRVKSVVDDGVKEIW
LSSEDTGAYGRDIGVNLPILLNAIVGALPSNGSTMLRIGMTNPPYILEHLKEIAEILRHP
CVYSFLHVPVQSGSDAILTAMKREYTAGEFRMVVDTLTELVPGMQIATDIICGFPGETDE
DFAQTVDLIKEYKFSQVHISQFYPRPGTPAARMKKVASNIVKKRSRELTSVFESFTPYNG
MEGNMERIWITDIATDEIHLVGHTKGYVQVLVVGPESLLGSSAIVKITSVGRWSVFGDVI
KILDESQGVVKKDTSNKENCSPSPCFDQQDACACSEAKPESCACGSNGCDIDANANANDS
YPEAQKAQNIPSLLLRRKPSLTTVEMEDNGNQKVATSNMQDRDWGVVDKLLVGGIFLSLL
TMVALILYVRF
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atggaagacatcgaggatttgttggtaggcggtggcgctgctccacccggtttccgactc
cccattaccgccgccgtcggaataaatccaatgaaaaagaagaaaaacaataaactagag
ccatcatctttgcttcaaaactcctcgactcatcaagtccctggcacccagacgattttt
ttgaagacatttggatgttcacacaaccagagtgacagtgagtacatggctggccagctt
tcctcatttggctatgctatcagtgacaacgcagaaggagcagatctttggctgataaat
acgtgtacagtgaagtccccaagccagtctgccatggacactttgatatcaaaatgtaaa
agtgcaaaaaagccacttgtggttgcaggatgtgtgcctcaaggaagtcgagatctgaaa
gagcttgaaggtgttagtatagttggagttcagcaaattgatcgggtcgtagaggttgtt
gaggagacccttaaaggccatgaagtcagacttctgaatcgcaaaactctcccatcactt
gatcttcctaaggtaaggaagaacaaatttgttgaaattcttccgataaatgttggttgt
ttgggggcttgcacatattgcaagactaagcatgctcgaggtcatctaggaagctatacg
gttgacagccttgtggggcgtgtgaaaagtgttgtggatgatggagtgaaagagatttgg
ttgagcagtgaagacactggggcatatggtcgtgatattggagtaaatcttccaattttg
ttaaatgcaatagtgggggcacttccatcaaatgggagcacaatgctccggattgggatg
actaaccctccttatattctggagcacttgaaggagattgcagaaatcctgagacaccct
tgtgtctattcatttcttcatgtacctgttcaatccgggagtgatgctatcttaactgcc
atgaaacgagaatatacagcaggggagttccggatggtggtagatacattgactgaactt
gttccagggatgcagattgcaactgatattatttgtggatttcctggtgaaacagatgaa
gattttgctcaaacagttgatttgatcaaggagtacaagttttcgcaagttcatatttct
caattctaccctcgaccaggaaccccagctgcaagaatgaagaaggtggcaagtaatata
gtaaagaaaagaagccgtgaattgacttcagtatttgaatcatttacaccttacaatggc
atggaaggaaacatggagaggatatggattactgatattgcaactgatgaaattcacctt
gtgggccacacaaagggatatgtgcaggttctggttgttggtcctgaaagtttgcttggg
tcttcagcaattgtaaagataacatcggttggaaggtggtctgtttttggtgatgtcatc
aagattcttgatgaaagtcaaggggtggtcaaaaaggatacaagcaacaaagaaaactgc
tcaccctcaccctgctttgatcaacaagatgcatgtgcatgttcagaggcaaagcccgaa
tcttgtgcttgtggatccaacggttgtgatattgatgcaaatgcaaatgcaaatgattca
tacccagaagcccaaaaggcccaaaatatccctagtttactattgaggagaaaaccgtca
ttgaccactgtggaaatggaagacaatggcaatcagaaagttgccacgagcaatatgcag
gatcgtgattggggtgttgttgataagcttcttgtaggtgggatttttctgagcttgttg
acgatggtagctctaattttgtatgtgcgtttttga
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