KEGG   Lactuca sativa (garden lettuce): 111916963
Entry
111916963         CDS       T05352                                 
Name
(RefSeq) coilin
  KO
K13150  coilin
Organism
lsv  Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:lsv00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:lsv03041]
    111916963
Spliceosome [BR:lsv03041]
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Other proteins involved in snRNP biogenesis
    111916963
SSDB
Motif
Pfam: Tudor_Coilin Coilin_N Ntox1
Other DBs
NCBI-GeneID: 111916963
NCBI-ProteinID: XP_023768377
LinkDB
Position
8:288783107..288788334
AA seq 650 aa
METQSLRLRLVFEDRSVLSETQRSYGMNQSWLLIEPQQHPKISDVCNHLLHIFNLRRSCP
NGILLYMEDFVLPPSESTRILKDKEIICVKRKEMALAEAIEGANAGNLLDYPEVNRKQPV
NNGMLLLANEEFDKETGGYQSESEDAEDEKLEDEPSPIQTASKKRKASKTSRSSSKKKKH
RSMMDGVEDEVVTEDNNINNDKFCPMKIIKPSKEKGSVETILVEVKSPPKVKRKKKHRVA
SGDEGEVRDEICNIDDDKIITKKKIKPNEELKKEDDEISDEKVKSSRRTKRSEEHQEDNV
QGIEQASTSPDEAKKGPSRSARRKKAKRQWKRELNKISQKPDTDTHLEGTNDHPKGHEKN
LIEEEKRKCNGNTDAQLVACVVKPGHIRFEPLDEDEDGREIEVADVAFEWNGITSKKKGQ
KWGLEKYSASRKIESQTSSKEESSPILNVDTVVDLNDFENLPLCTSPKEGDVIAYRLVEL
SSSWTPELSSYRVGKVSHFDSNNIVLNPVAEYPILFDKMDEEGPDNYSLYKEDGSLEIDF
TGLVDVRSVKQMQSNGVGQSQTVTQGDGVNLISKDPSPVCEVKRKKEGNNDKTWSEVMEA
LNKKKSELVMEANEEMKKKKDSEWNRWSYRALRGSALGPTMALLRSNNNI
NT seq 1953 nt   +upstreamnt  +downstreamnt
atggagacgcagtcattaaggcttcgtttggtgttcgaagatcgttcggttcttagcgaa
acacagcgctcctatggtatgaaccagagctggcttctaattgagccacaacaacatccg
aaaatctccgacgtctgtaatcatcttcttcacattttcaaccttcgtcgctcgtgccct
aatggcatcctcctctatatggaagactttgtattgcccccatctgagtcaactcgaatc
ttgaaggacaaggaaataatttgtgtgaaaagaaaagaaatggctttggctgaagcaata
gagggggcaaatgctggtaatttacttgactatccagaagtcaacaggaagcaacctgta
aataatggcatgttacttctagcaaatgaagagtttgataaggaaactggaggataccaa
agtgaatctgaggatgctgaagatgaaaagttggaagatgaaccttcacctatacaaaca
gcttccaagaaaagaaaagcctctaaaacatctaggagctcatcaaagaagaagaaacac
cgatcaatgatggatggagttgaagatgaagttgtgacagaggacaacaacattaataat
gacaaattttgtcccatgaaaatcattaaaccaagcaaggagaaggggagtgttgaaaca
atccttgtagaggttaaatctcctcccaaggtgaagaggaagaagaaacacagggtggca
agtggtgatgaaggtgaagttagagatgaaatttgcaacattgatgatgataaaatcatt
accaagaagaagattaaaccaaatgaggaactaaagaaggaagatgatgaaataagtgac
gaaaaggttaaatcttctcgaaggacaaagaggagtgaagaacatcaagaagacaatgtc
caaggaattgaacaagcctctacttcacccgatgaggctaaaaagggccctagtagaagt
gctagaaggaaaaaggctaagagacaatggaagcgagaacttaataaaatttcacaaaag
cctgatactgatacccatctagaagggacaaatgaccacccgaaggggcatgaaaagaat
ttgatagaagaagaaaaaagaaaatgtaatgggaatacagatgctcaacttgttgcttgt
gtagtcaagccaggtcatattcgctttgaacctcttgatgaagatgaagatggaagagag
attgaagtagcagatgtagcttttgaatggaatggaatcacgagcaagaaaaagggtcaa
aaatggggattagaaaagtattcagcttctagaaagatcgagtcccaaacatcaagcaaa
gaagaatcctctccaattttgaatgtagacacagtggttgacctcaatgactttgagaat
ctccctctatgcacctcacctaaggaaggtgatgtgattgcatacagacttgtggaatta
tcatcttcttggactcctgagctctcttcctacagagttggaaaagtatcacattttgat
tccaataacatagttctgaatccggtggcagagtatcctattctttttgataagatggat
gaagagggcccagataattactctctttataaagaagatggaagtttagaaatcgatttt
acaggtcttgttgatgtgcgtagtgtgaagcaaatgcaaagtaatggagttggtcaaagt
caaactgtaactcagggtgatggagtaaatttgatctctaaggacccaagtccagtttgt
gaagtaaaaagaaagaaagaagggaataatgataagacatggagtgaggtgatggaggca
ttaaacaaaaagaaatcagaattagtaatggaagcaaatgaagagatgaagaagaagaag
gattctgaatggaatcgatggtcatatagagccttaagaggaagtgcacttggtccaaca
atggctttattaagatcaaacaataacatataa

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