Lactuca sativa (garden lettuce): 111917069
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Entry
111917069 CDS
T05352
Symbol
GTB1
Name
(RefSeq) global transcription factor group B1
KO
K11292
transcription elongation factor SPT6
Organism
lsv
Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lsv03021
]
111917069 (GTB1)
03036 Chromosome and associated proteins [BR:
lsv03036
]
111917069 (GTB1)
Transcription machinery [BR:
lsv03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
111917069 (GTB1)
Chromosome and associated proteins [BR:
lsv03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
111917069 (GTB1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
HHH_7
SPT6_acidic
YqgF
Spt6_S1
HTH_44
HHH_9
Tex_central_region
SH2
S1
HHH_3
EXOSC1
S1_RRP5
OB_PDCD11
Motif
Other DBs
NCBI-GeneID:
111917069
NCBI-ProteinID:
XP_023768494
LinkDB
All DBs
Position
8:complement(130351359..130358000)
Genome browser
AA seq
1604 aa
AA seq
DB search
MAGKTVLSDEEDEIEVEEDEREEPDGDAVEDRDEEDDEEDEEGEDEYEKDGFIVDDIDED
EQDAEEEDRADSDDERQKKKKRKKRESEKNYVLDEDDYELLQDNNITGFRRPKAESKKFK
RLKKARSDADEGQSGFSDEDDYNRSGKSGRSAEQKIEHSLFGDDEGPPLEDIAEEDQPEE
EEDGDIGEEEDEMADFIVDEEEVDEHGEPTRRRKVNKKKSRQAPGVSSSAIQEAHDIFGD
VDELLRQRKLGLERISRYDDSGEGKERRLEDEFEPTILSNKYKTEKDEYIREIDIPERMQ
ISEESTGPPPTDEMSIEEESTWILHQLQTGVVLFSRGGDRTTEEGHDLAIVKDDIMRFLE
FMHVQKLDVPFIAMYRKEECMSLFKDPEPQDDKESENKSEKKPTLRWHKVLWAILELDRK
WLMLQKRKSALQSYYNKRFEEERSVYDEARLHLNQKLFDSITKSLKVAESEREIDDVDSK
FNLHFPPGDAGMDEGQFKRPKRKSQYSVCSKAGLWEVATKFGYSSEEFGLLISLEQMRME
ELEDAKETPEEVASRFTCAMFENPQAVLRGARHMAAVEISCEPCVRKHVRSIFMDNAVVS
TTPTSDGNKAIDSDHEFAGIKWLNNKPLTRFNDAQWLLIQKAEEEKLVQVSVKLPASVHD
KLISDAHDYYLSDGVSKSAQLWNEQRKLIIKDAFDGLLLPSMGKEARGILASRAKNWLLM
EYGRLLWDKVSVAPYQKKEHDVNSDDYDGAPRVMACCWGPGKPATTFVMLDSYGEVVDVL
YASSISIRGQNANDQQRKKNDQQRLVKFMTDHQPYVVVLGAVNLSCRSLKDNIFEIIFKM
VEENPRDLGHDMEGGVVYGDESLPHLYENSRISSEQLQPQPGIVRRAVGLGRYLQNPLAM
VATLCGPAKEILSWKLSPLESFLTPDEKYGMVEQIMVDATNQVGLDINLAISHEWLFGPL
QFISGLGPRKAASLQRSLVRAGSIYTRKDLLNHGLDKKVFVNAVGFLRVRRSGNAASSSQ
FIDLLDDTRIHPESYGLAQELAKEVFRKHSGGDDGNDDEDMLEMAIEHVREHPNQLRSLK
VDNYARSKKQENKKVTLNDMRSELIQGFQDWRRPYVEPNDDQAFYMICGESEDTLCEGKI
VQATVRRVQPQKAICSLDSGLTGMLNKEDYSDERRDNIDLTESLNEGDIITAKIKSIEKK
RYMVFLSCKDSDLRSSVDTQKYKTMDPYYYEDRDNSEIEKEKANKAKALAKKHFKSRMIV
HPRFQNITADEAMEMLSDKEPGESIVRPSSRGPSYLTLTLKIYDGVYAHKDIIEGGKENK
DITSMLRLGKTLKIGEDVFEDLDEVMDRYVDPLVTYLKTMLGYRKFKDGEKAEVDESLRK
EKLENPSRIVYSFGISHEHPGTFILTYIRSSNPHHEYIGLYPKGFKFRKKMFEEIDRLVA
YFQRHIDDPHDAGPSIRSVAAMVPMRSPAGGGWGGGGGGSNNSSDWRGSSGDRERTSTPS
SRPGRGDFRSGGGGHESGVPRPYGGGGGGRGRGRGRGSFNNRGGDDRSKDWEEGWGGFPG
GKTQNSPGGEAFNGGWADGGGSGGGGGKRSSVQSDSGAGWSSGW
NT seq
4815 nt
NT seq
+upstream
nt +downstream
nt
atggctggaaaaactgtattatcagacgaagaagatgagattgaagttgaagaggatgag
agggaagagcctgatggggatgcagttgaagatcgcgacgaagaggatgacgaggaagat
gaggaaggagaagatgagtatgagaaagatggtttcatagtggatgatattgatgaagat
gaacaggatgctgaggaagaggatagggcggatagtgatgatgagagacaaaagaagaag
aaaagaaagaaaagggaatcggaaaagaactatgttcttgatgaagatgactatgagctt
cttcaagataacaacatcactggatttcgacgaccaaaagccgagagtaaaaagtttaag
cgactaaagaaagcaaggtctgatgctgatgaagggcaatcaggattttctgatgaagat
gattataatagaagtggaaagagtgggcgaagtgcagagcagaaaatcgagcatagttta
ttcggggatgatgaaggtccaccccttgaggacattgctgaagaggatcaacctgaagag
gaagaggatggtgacattggtgaggaagaagatgaaatggctgacttcattgttgatgag
gaagaggttgatgaacatggtgaaccaacaaggaggaggaaggtcaacaagaaaaagtca
agacaggccccaggggtttcctctagtgcaatacaggaagctcatgatatatttggtgat
gtggatgagctgttgaggcaacgcaagttgggactagaaagaatcagtagatatgatgat
agtggtgaagggaaggaaaggaggcttgaagatgaatttgagcccaccattctttccaat
aaatacaaaaccgaaaaagatgagtacattcgtgagatagatattccagaaagaatgcag
atatctgaggaaagcactggtcctccaccaacagatgaaatgagtatagaagaggagagt
acttggattcttcatcaacttcaaacgggtgtggtattgtttagcagaggaggcgataga
acaaccgaagaagggcatgacctggcaatagttaaggatgacatcatgcggtttttagaa
tttatgcatgtccagaaattagatgtaccgtttattgctatgtataggaaagaggagtgc
atgagcctttttaaggatccagagccacaagatgacaaggaaagtgaaaacaaatctgag
aaaaaacccacgctgaggtggcacaaggttctttgggctatcttggagctagacagaaaa
tggttgatgcttcaaaaacgaaaaagcgcgttacagtcatactacaacaagcggtttgaa
gaagaacgaagcgtgtatgatgaggcacgtcttcatttgaaccagaaactgtttgattca
atcaccaagtccctcaaagttgctgagtcagaaagggaaattgatgacgtggactcaaaa
tttaacctacatttcccccctggtgatgctggcatggatgaaggacagttcaaaagacca
aagagaaaatcacaatatagtgtttgcagcaaagctggactatgggaggttgctaccaag
tttggctacagctctgaggaatttggattattgatttctcttgaacaaatgaggatggaa
gaattggaagatgcaaaggaaacaccagaagaggtggcctcaagatttacttgtgcaatg
tttgaaaatccgcaggctgttctcagaggcgctaggcatatggctgcagttgaaattagt
tgtgagccatgtgtgaggaaacatgtgcgcagcatcttcatggacaatgcagtggtgtcc
actactcccacatctgatggcaacaaggccatagattctgatcatgaatttgcagggata
aagtggttgaataacaaacctttgacaagatttaatgatgcacagtggcttcttattcaa
aaagcagaagaggagaagcttgtacaagtatctgtaaagcttccagcttctgttcatgat
aagttgatcagtgatgctcatgactactaccttagtgacggcgtgagtaaatctgcccag
ttatggaatgaacaaaggaaactgatcataaaagacgcgtttgatggtttgcttttacct
tcaatgggaaaagaagcgagaggcattttggcaagtagagccaaaaactggttactcatg
gaatacggaaggttattatgggataaagtgtctgtggcaccttatcagaaaaaagaacac
gatgttaattcagatgattatgatggtgcaccgagggttatggcgtgctgctggggccca
gggaaacctgcaacaacatttgtgatgttggattcatatggagaagttgttgatgttctg
tatgcatcttccataagcatccgtggtcaaaatgctaacgaccaacaacgtaaaaagaac
gatcaacaacgtcttgttaaattcatgacagatcaccaaccttatgttgttgttcttgga
gctgtcaatttgtcttgcagaagcttaaaagataatatttttgagatcattttcaagatg
gtagaagaaaaccctagagatcttggacatgacatggaaggtggtgttgtatatggtgac
gagtctctcccacacctgtatgaaaattctcgtatatcatccgaacagcttcaaccgcaa
ccaggaattgtaaggcgagcggtgggcctaggacgataccttcaaaacccattggcaatg
gtcgctaccctgtgtgggcccgcaaaggagatattatcatggaaactgagtcctttagaa
agctttctaactccggatgagaaatacgggatggttgaacagatcatggtggatgccacg
aatcaggtgggtcttgacatcaacttagccataagtcacgaatggctttttggtcctttg
cagttcatttcggggctgggaccccgtaaagcggcttctttacagcggtcgttagtgagg
gctgggtcgatatacacgagaaaggacctgttgaaccacggtctggacaagaaggtgttt
gtaaatgctgttgggtttttacgtgttcggcggagtggaaacgccgctagcagcagccag
ttcattgatttgttggatgacacgagaatccacccggaatcgtatggtcttgcacaggaa
ttggctaaagaggtgttcagaaaacattcaggaggagatgatggaaacgatgacgaggat
atgctggaaatggcgatcgagcatgtgagagaacaccctaatcagttgaggagtcttaag
gtggataactatgcaagatccaagaaacaggagaacaaaaaggtgactctgaatgatatg
agatcggagctgattcaaggttttcaagactggcggagaccgtatgtggaaccgaatgat
gaccaagccttttatatgatatgtggggaaagtgaggatacgctgtgcgagggtaaaatc
gtccaggccactgttcgtagggttcaacctcaaaaggccatatgctctctcgattcgggg
ctcactggtatgctcaacaaggaagattacagtgatgagcggagggataatattgatttg
actgaaagtctgaatgaaggggacatcatcacggcaaagataaaatcaattgagaaaaag
aggtacatggttttcttaagctgtaaagacagtgatttaaggagtagcgtcgacactcaa
aagtataaaaccatggatccgtattattatgaagaccgtgacaattcagaaattgaaaaa
gaaaaagcaaataaagcaaaagcgctagcaaagaagcatttcaaatcaagaatgattgtt
catcctcgcttccagaatatcacagccgatgaagcaatggagatgctgtctgataaggag
cctggtgagagcattgttcgtcctagctcacgtgggccctcatacctaacactgacactc
aaaatctatgatggtgtttatgctcacaaagacattatagaaggtggaaaggagaataag
gacattacaagcatgttaaggcttggaaaaacactaaaaataggagaggatgtatttgaa
gatctagatgaggtgatggatcggtatgttgatcctttagtgacatatttaaagacgatg
ttgggttataggaagtttaaagatggggagaaagcggaagtggatgagagtttaaggaaa
gaaaaacttgagaatccatcaaggattgtttactcatttggtatatcccatgaacaccca
ggcacgtttatattgacatacatacgaagctccaatccgcatcatgagtatattggattg
tatcccaagggctttaaattcagaaagaaaatgtttgaggaaatcgacagacttgtcgcc
tattttcaaagacacattgatgatccacatgatgcgggaccctccattcggtccgttgct
gccatggtgcccatgcgcagccctgcaggtggtggatggggcggcggcggcggcggctct
aataatagcagcgactggagaggttcatccggagatcgagaaagaacatcaactccgagt
tctagaccaggtagaggtgatttcaggagtggcgggggtggtcacgaaagcggtgtgccg
agaccttacggtggtggcggtggtggacgtgggcggggccgagggcgggggtcatttaac
aaccgtggtggagacgataggtctaaggattgggaagaagggtgggggggtttcccaggt
ggaaaaactcagaactctccaggaggagaggcttttaatggcggttgggctgatggtggt
ggtagtggtggtggcggcggcaagagaagctctgtgcaatcggatagcggtgcagggtgg
tcgagcgggtggtag
DBGET
integrated database retrieval system
