Lactuca sativa (garden lettuce): 111917082
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Entry
111917082 CDS
T05352
Name
(RefSeq) RHOMBOID-like protein 1
KO
K27605
rhomboid-like protein, plant [EC:
3.4.21.105
]
Organism
lsv
Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lsv01002
]
111917082
Enzymes [BR:
lsv01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.105 rhomboid protease
111917082
Peptidases and inhibitors [BR:
lsv01002
]
Serine peptidases
Family S54: Rhomboid family
111917082
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Rhomboid
DUF6199
EMC6_arch
Motif
Other DBs
NCBI-GeneID:
111917082
NCBI-ProteinID:
XP_023768513
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All DBs
Position
8:complement(130315656..130317957)
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AA seq
397 aa
AA seq
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MAETHRPEIQLKVNSRRGLGVGNVIHPVEVESSPTPLLAAQRAGYQSQTPSPFREIKHFK
KWFPWLIPSFVIADVVMFIITMYVNNCPKNSVTCIVTFLGRFSFQPFKENPLLGPSSSAL
EKMGALDVNKVVDDHQGWRLITCIWLHGGLLHLLANMLSLLVIGIRLEQEFGFIRIGLLY
IISGFGGSLLSALFLQSNISVGASGAVFGLLGAMLSELITNWTIYANKLAALVTLVIIIA
INLAVGILPHVDNFAHLGGFSSGFLLGFVFLMRPQFGWVSQRYAPPYSRAGANKPKYKTY
QRVLWVLSLILVVTGMIVGLVALLRGVNLNDHCSWCHYMSCVPTSRWSCDTSAVSCVSEQ
TDNQYTLTCSDSGKNGTYTLTDPNTSQLRGLCSQLCR
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atggcggaaacccatcggccggagatccaactcaaagtcaattctaggcgcggtctcggc
gttggaaatgtaattcatcctgttgaagttgagtcatcaccgacacctctgctggcggca
caacgcgccggatatcaaagtcaaaccccatctcctttccgggagattaagcattttaag
aagtggttcccatggttgattcctagttttgttatagcagatgtcgtcatgtttataatc
acgatgtatgtcaacaattgccccaaaaactcggttacttgcatcgttaccttcttgggg
aggttttcctttcagccattcaaagagaatcccctcctcggtccttcttcttcggcgcta
gagaagatgggggctttggatgtgaataaagtagttgatgatcaccaggggtggcgcctc
attacttgcatttggttacacggtggacttctccatttattagcaaacatgctgagtctc
ttagttattggcattcgactggagcaagaatttggattcatacgcattgggctgctttat
atcatatctggatttggtggcagtttattgtctgctcttttccttcaatccaacatatca
gttggtgcttctggtgcagtttttgggttgctaggtgcaatgctatcagaactcataacc
aattggacaatatatgccaacaagttggcagcattagtgacacttgtgatcattattgca
atcaatctagcggttgggattctgccacatgtcgataatttcgctcatcttggtggattt
tcatctggttttcttctagggtttgtgttcttgatgcgccctcaattcggatgggttagc
caaagatacgccccaccttattctagggctggagccaataagcccaaatacaagacatat
cagcgagttctgtgggtcctttcattgatccttgtggtgactgggatgattgtggggctt
gtcgcacttcttcgtggagtgaacttgaatgaccattgttcttggtgccattacatgagt
tgtgtacctacgtctaggtggagctgtgacacatcagccgtgtcatgtgtgtctgagcaa
acggataaccagtatacattgacgtgctccgacagcggtaaaaatggtacatacacattg
acggatccaaatacgtctcagttacgtggtctttgtagtcagctttgtagatag
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