Lactuca sativa (garden lettuce): 111917174
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Entry
111917174 CDS
T05352
Name
(RefSeq) actin-related protein 2/3 complex subunit 1A
KO
K05757
actin related protein 2/3 complex, subunit 1A/1B
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv04144
Endocytosis
lsv04517
IgSF CAM signaling
lsv05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
111917174
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
111917174
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
111917174
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lsv04131
]
111917174
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lsv04812
]
111917174
Membrane trafficking [BR:
lsv04131
]
Others
Actin-binding proteins
Arp2/3 complex
111917174
Cytoskeleton proteins [BR:
lsv04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Arp2/3 complex
111917174
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
Beta-prop_THOC3
Beta-prop_WDR5
WD40
WD40_WDHD1_1st
Beta-prop_WDR3_1st
WD40_CDC20-Fz
WD40_Prp19
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
Beta-prop_WDR35_TULP_N
WDR55
Beta-prop_WDR75_1st
Beta-prop_IFT140_1st
Beta-prop_Aladin
Tricorn_2nd
EIF3I
WD40_Gbeta
Beta-prop_WDR3_2nd
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR36-Utp21_1st
RMC1_N
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
B-prop_COPA_B_2nd
Ge1_WD40
eIF2A
BNR_3
Motif
Other DBs
NCBI-GeneID:
111917174
NCBI-ProteinID:
XP_023768596
LinkDB
All DBs
Position
4:complement(85211683..85215994)
Genome browser
AA seq
377 aa
AA seq
DB search
MAAIAVNQFAECVTCHAWSPDHSMIALCPNNHEVHIYKSVEENWERIHVLQKHDQIVAGI
DWSKSSNRIVTVSHDRNSYVWNQEGSVWVPTLVILRLNRAALCVQWSPKGNKFAVGSGAK
TVCICYYEQENNWWVSKLIRKKHDSSVTSVAWHPNNVLIATTSTDGKCRVFSTFIKGVDA
GKPRKSGSGSSLDAKFGEQIVQLDLSFCWAFGVKWSPSGNSLAYVGHNSMIYFVDHIGPS
PSAQSVVLRDLPLRDVMFVSEKLVIGVGYDCNPMVFAADGIGSWSFVRFLDEKKSASSSA
RYGSQLTEAFGKFYGSSKQGTSNDKSRGGVHDNCINCIVPFKTSSGSNKMTSFSTSGLDG
KVVIWDLKNQEDLLEYM
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atggcggcaattgcagttaatcagtttgctgagtgcgttacttgccatgcttggagcccc
gaccactcaatgatagctctttgtccaaacaatcatgaggttcacatctacaaatcagtt
gaagaaaattgggaaaggattcatgttctgcaaaagcatgaccaaattgttgcaggaata
gattggagtaaatcatcaaacagaatagttactgtgtctcatgatcgcaattcgtatgtt
tggaatcaagaaggatctgtatgggtaccaactcttgttatcctcaggctcaatcgagct
gcactctgtgtgcaatggagccctaaaggaaacaaatttgctgtgggaagtggagctaaa
actgtttgtatatgttactatgagcaggagaataactggtgggttagtaagctaatcagg
aaaaagcatgattcttctgtgaccagtgttgcttggcatcctaataatgttctcattgct
acaacatctaccgatggaaaatgtcgagttttctcgacttttattaaaggggttgatgca
ggtaaaccaaggaaatcaggaagtggctcctcattagatgcaaaatttggagagcaaatt
gttcagcttgatctctcattttgttgggcttttggtgtcaaatggtccccaagtggaaat
agcttagcttatgtaggtcataattcaatgatatactttgttgaccatatcggaccttcc
ccttctgctcaaagtgtagtattgcgtgatttgcctcttcgtgatgttatgtttgtctct
gagaaacttgtaattggtgtgggatatgactgcaatcccatggtttttgcagcagatgga
ataggatcatggagctttgtgaggttccttgatgaaaaaaagtcagcatcttctagtgca
agatatgggtcgcagctgacagaagcatttgggaagttctatggaagctcaaaacaggga
accagtaatgataaatctcgtggtggtgttcatgacaactgcatcaattgcattgtgcct
ttcaagacatcatcagggagtaacaaaatgacaagctttagcacttcaggattagatgga
aaagttgtgatatgggatttgaaaaatcaggaagacttactcgagtatatgtaa
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