Lactuca sativa (garden lettuce): 111917194
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Entry
111917194 CDS
T05352
Name
(RefSeq) serine/arginine-rich splicing factor RSZ22A
KO
K12896
serine/arginine-rich splicing factor 7
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111917194
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lsv03041
]
111917194
Spliceosome [BR:
lsv03041
]
Common components
Common spliceosomal components
SR proteins
111917194
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
zf-CCHC
RRM_7
TP2
Motif
Other DBs
NCBI-GeneID:
111917194
NCBI-ProteinID:
XP_023768622
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All DBs
Position
3:35889166..35891278
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AA seq
195 aa
AA seq
DB search
MSRVYVGNLDPRVNEREIEDEFRTFGVIRSVWVARRPPGYAFVDFDDKRDAQDAIRELDG
KNGWRVEMSHNSRGGGGGGGGGGRGGGRGRSGGSDLKCYECGEPGHFARECRGGGGGGGG
GGRRRSRSRSRSPARYRRSPSYGRRSYSPRGRSPPRRSLSPPRKANYSRSPPYRGRDEVP
YTNGNGLKDRRRSRS
NT seq
588 nt
NT seq
+upstream
nt +downstream
nt
atgtcacgtgtctatgttggtaatctggacccaagggttaatgaaagagaaatcgaggat
gaattccgcacttttggtgtcattcgtagcgtgtgggttgcaagaaggcctccaggctat
gcttttgttgattttgatgacaaaagagatgctcaggatgccatccgagaacttgatggt
aagaacggttggagagtagagatgtctcataactctagaggaggaggcggcggcggcggt
ggcggcggtcggggaggaggtcgtggtcgctccggtggttctgatctgaaatgctatgaa
tgtggtgagcctggtcattttgctcgtgagtgccgtggtggtggcggcggcggcggcggt
ggaggtagacgtcgcagccggagccgcagccgcagccccgctagataccgccggagccct
agctatggtcgcaggagttacagtccgcgtgggcggtcaccgccacgccggagtttgtca
ccacctcgtaaggcaaactacagcaggtcaccaccgtatcgtggacgtgatgaagtgcca
tacacaaacggaaatgggcttaaggataggcgtcgtagcaggagctga
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