Lactuca sativa (garden lettuce): 111917450
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Entry
111917450 CDS
T05352
Name
(RefSeq) ABC transporter B family member 13
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
111917450
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lsv02000
]
111917450
04147 Exosome [BR:
lsv04147
]
111917450
04090 CD molecules [BR:
lsv04090
]
111917450
Enzymes [BR:
lsv01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
111917450
Transporters [BR:
lsv02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
111917450
Exosome [BR:
lsv04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
111917450
CD molecules [BR:
lsv04090
]
Proteins
111917450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
ABC_ATPase
AAA_16
AAA_29
AAA_30
nSTAND1
AAA_21
RsgA_GTPase
DEAD
DUF87
Zeta_toxin
ATP-synt_ab
AAA_24
AAA_23
YobI-ATPase
Mg_chelatase
NB-ARC
G-alpha
MeaB
Motif
Other DBs
NCBI-GeneID:
111917450
NCBI-ProteinID:
XP_023768908
LinkDB
All DBs
Position
2:complement(19858104..19867974)
Genome browser
AA seq
1242 aa
AA seq
DB search
MGEVEILSNQDYGENPTPKVELKTDSSSKASFSGLFYAADKWDLLLMLFGSIGACVHGAA
LPIFFVLFGRMIDSLGHLSSHPHRMSSEVCKNSLYLVYLGLVVFVSSWIGVACWMQTGER
QTGRLRFKYLQSVLRKDIKFFDTIAKDKNILFHISSDATLVQDAIGDKIGHGLRYLAQFF
VGFTVGFTSVWQLTLLTLAIVPLIAFAGGAYTVIMSTLSEKSEAAYAEAGKVAEENISQV
RTVYSFVGEKRAIEMYSMSLQNALKFGKKSGLAKGVGIGFTYALLFCAWALLLWYAGILV
QHHRTNGGKAFTTIINVIFSGFALGQAAPNLAAIAKGKVAAANIVSMLEEDIESTRKLNS
GMAFSKVAGNIEFHEVYFAYPSRQNTVLENLSFSIGAGKKIAVVGPSGSGKSTIISMIQR
FYDPISGQILLDGHDIKTVQLSWLRGLMGLVSQEPALFATTIAENILYGKPNADMAHIIE
ASIAANAHSFIQKLPESYQTHVGEGGTQLSGGQKQRIAIARATIRNPKILLLDEATSALD
SESEHIVQQSLNTVMSNRTTVIVAHRLSTVRDVDTIIVLKNGQIIEKGNHLELISKGGEY
SSLVSLQTNSGQTGSNSNPQNSPDTNRTNFEDFDPITTNLNTLHPNEKNQSASRSSRNTP
SIWDLVKLNQPEWPYAVVGSVGAILAGMQAPLFALGITYILTSFYSRDNSKIKDDVAHAS
LIFVAAGVVTIPIYMLQHYFYTLMGERLTTRVRLSMFSAILSNEIGWFDFDENSTGSLLS
KLAADATLVRSALADRLSTIVQNIALTLTAFVISFILSWRIALVVISTFPLLIAASLTEQ
LFLKGFGGDYTTAYSRATSVAREAMTNIRTVAAFGAEDRVSTQFAAELNRPGKQARLRGH
ISGIGYGFSQLLAFCSYALGLWYASVLIQHKNSNFGDIIKSFMVLIITALSIAETLALAP
DIVKGTQALGSVFEILNRVSSINPDHRDLLVVDNIKGDIEFRNVSFAYPTRPEIKVLNGL
NLKLMAGNSLAVVGPSGSGKSTVIGLVTRFYDPDLGAVFIDSFDIKKLNLKSLRKRIGLV
QQEPSLFSTNIYENIKYGNENASEIEVINAAKLANAHEFISRMPEGYKTEVGSKGVQLSG
GQKQRVAIARAVLKDPSILLLDEATSALDIASERLVQEALDKLMEGRTTVLVAHRLSTVR
NADSIAVLQNGTVVESGTHDMLVGMPGSVYAHLVSLQQEKSM
NT seq
3729 nt
NT seq
+upstream
nt +downstream
nt
atgggggaggttgaaattttgtcaaatcaagattatggtgaaaacccaactccaaaggtg
gagttaaaaacggattcaagttcaaaagcttcattttcgggattattttatgcagctgat
aaatgggatttgcttttaatgttgtttgggagcattggagcttgtgttcatggtgctgct
cttccaattttctttgttttgtttggtcgaatgattgattctttgggccatttatcttca
catcctcatagaatgtcttcagaggtttgtaagaattctctatacttggtttatcttgga
ctcgttgtttttgtgtcatcatggataggtgttgcatgttggatgcaaacaggagaaaga
caaacaggtcgtctacgtttcaaatatctccaatctgttttgagaaaagatattaagttt
tttgacacaatagccaaggataaaaacatacttttccacatttctagtgacgcgacactt
gtgcaagatgcaataggtgacaagataggccatggtttaagatatcttgcacaattcttt
gttggattcacagtgggatttacttcggtatggcaactcacacttctgacattggccatt
gtcccactcatagcttttgctggaggagcgtatacagtgatcatgtctacattgtctgaa
aaaagtgaggctgcttatgctgaagctggaaaggtcgctgaggagaatatatcacaagtt
cgtactgtatattcgtttgtgggggagaaaagggcaattgaaatgtactcaatgtcactt
caaaatgcattaaaatttgggaaaaagagtgggcttgcgaaaggagtgggaattgggttc
acatatgcacttttgttttgtgcttgggctttacttttatggtatgcgggtatactcgtg
caacaccatcgcacaaatggtggtaaagcattcacaacaatcatcaatgtcatcttcagt
ggatttgctctaggtcaagctgcaccaaacctagcagccattgctaaaggtaaagttgct
gctgcaaacatcgtaagcatgcttgaagaagacattgaaagtacaagaaagttgaattct
ggaatggcattctcaaaagtggctgggaatatcgaattccatgaggtctatttcgcgtat
ccgtctcgacaaaatacagttttagaaaatttgagtttttcaatcggtgcggggaaaaag
attgcagttgttggtccaagtggttcgggaaaaagcacaatcatttctatgatccaacga
ttttacgatcctatctcagggcaaatattgttagatggccatgatataaaaactgtgcag
ttaagttggttaagagggcttatggggttagtcagtcaagaaccagccttatttgccaca
acaatagccgaaaacattctgtatggaaaacccaatgccgatatggcccacataatcgaa
gcctccatagccgcaaacgcccattctttcattcaaaaactaccggaaagttaccaaact
cacgtcggcgaaggcggaacccagctttccggtggccagaaacaaagaatcgcaatcgca
agagccacaattcgaaaccctaaaattttacttctcgatgaagcaacaagcgccctcgat
tccgaatcagaacacatcgttcaacaatcgttaaacaccgtcatgtcaaatcgaaccacc
gttatcgtcgctcatcgattatccacagttcgagatgtcgacaccattatcgttctgaaa
aacggtcaaatcatcgaaaaaggtaatcatttggagttgatctctaaaggcggagagtat
tccagtctagtaagtctccaaaccaattcgggtcaaaccgggtcgaactcaaacccccaa
aactctccagatactaaccggaccaatttcgaagactttgacccgataaccacaaattta
aatacactccacccaaatgagaaaaaccaatcggcgtccagatcttcgaggaatacgccg
tcgatttgggaccttgtgaagctaaatcagccggagtggccgtatgcggtggtgggatcg
gtgggtgcgattttggcgggaatgcaagctccattatttgctcttgggattacttatatc
ttgacgtcgttttattctcgtgataattcgaaaatcaaagatgacgtggctcatgcatcg
cttatatttgtggctgcgggtgttgtaacgattcctatttatatgttgcagcactatttc
tatacgttgatgggagaacgcctcaccactagggtccgtttatccatgttttcagctata
ctaagcaatgagattggttggtttgattttgatgaaaattctacgggatcgcttttatca
aagttggcagcagatgcaacactagtacgaagtgcattagcagatcgtctatcaacaatc
gtacaaaatatagcactcacattgactgcgtttgtgatatcatttatattaagttggaga
attgcattagttgtcatttctacgtttccccttttaattgcagcttccttaacagagcaa
ctctttcttaagggattcggtggagactacacaaccgcgtattcccgagccacatccgtg
gctcgtgaagcgatgaccaacatccgaaccgtagccgcattcggagccgaagaccgagtc
tcgactcagttcgccgccgaactcaaccgccccgggaaacaagcccgtctccgcggtcac
atatcgggaatcggatacggtttttcccaactccttgcattttgctcatacgcgcttggc
ctttggtacgcatcggtattaatccaacacaaaaattccaatttcggcgacattattaaa
tccttcatggtcctaataatcaccgcgttatcaatagctgaaacccttgcactcgccccc
gacattgtgaaggggacacaagcactcggttcagtattcgaaatacttaaccgagtgtct
agtataaatcccgaccatcgggatttattagtagtagataacattaaaggagatattgaa
tttagaaacgtgagcttcgcgtacccgactagaccggaaattaaagttttgaatggttta
aatttgaaattaatggcgggaaatagtttggcggtagttggaccgagtgggtccgggaaa
agcaccgtgatcggactcgtaacgagattttacgatcccgatctcggtgcagttttcatt
gacagtttcgatatcaagaaattgaatttaaaatcgttaaggaaacggattggattggtt
caacaagaaccatcgttattttcaacgaatatatacgaaaatataaaatatggtaatgaa
aatgcgtccgaaattgaagtcataaacgccgcaaaacttgcgaatgctcatgaattcatt
agccggatgccggagggttacaaaacagaagtggggagcaaaggggtgcagttgtccgga
ggacaaaaacaacgggtggcgattgcgagagcagtattgaaagatccatcgattcttttg
ttagatgaagcgacgagcgctcttgatatagcctctgagagactggttcaagaagcgctt
gataagttgatggagggaagaaccaccgttctggtggcccaccgcctgtcgacagtacgt
aatgccgacagtatcgcggtgctccagaatggaacggtggttgagagtgggacacatgac
atgcttgttggcatgccagggagtgtgtatgcacatttagttagtcttcaacaagagaaa
agcatgtag
DBGET
integrated database retrieval system
