Lactuca sativa (garden lettuce): 111917540
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Entry
111917540 CDS
T05352
Name
(RefSeq) uncharacterized protein LOC111917540 isoform X2
KO
K13091
RNA-binding protein 23/39
Organism
lsv
Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lsv03041
]
111917540
Spliceosome [BR:
lsv03041
]
Common components
Common spliceosomal components
General mRNP proteins
111917540
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_7
Motif
Other DBs
NCBI-GeneID:
111917540
NCBI-ProteinID:
XP_023768984
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Position
5:complement(91487709..91492005)
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AA seq
594 aa
AA seq
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MDFDEYEYLEKTVDESDTRNGSSSKTKDVSSEKSEKGHRRKGREDDGEDAEDDRIEERRR
SKKYKGDEENGGSRRDVDRDRDHGRSREERSSRSERHRSSGRDGERDVERERERDRRRSS
RDGDRERSSRGRDKDEDKDKERERRDRDRDRDREKRDKERERERERERERETSRRSRSHS
RLEREREKELIRERERELESRESRRLKDKKDAVEPEADPERDQRTVFAYQMPLKATEWDV
YEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDAMSVPMAIALSGHLLLGQPVMVKPSE
AEKNLVQSTATSGAAGGGAGAFGAVDRKLYVGNLHFNMTELQLKQIFEAFGPVELVQLPT
DPETGHCKGFGFVQFAQLEHSKAAQSLNGKLEIAGRTIKVSSVTDHVTAQDTGAKAADFD
DDDGGGLALNAQSRAMLMAKLDRSGITTGIPGAIGAPIVNGSGPIQGGGLGMNVAAAAAA
TIPILPPQIVSEPIGNPSECLLLKNMFDPATESDPEFDLDIKEDVGEECSNYGRVKHIYV
DKESAGYVYLRFESVEAASRAQQAMHKRWFARRLISAIFLQPYEYEAKFKGVAA
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atggacttcgacgagtacgagtacttggagaagactgtcgacgaatccgacaccaggaat
ggttcatcttcgaagaccaaagacgtcagctcggagaagagcgaaaagggtcacaggcgg
aagggaagagaagatgatggcgaagatgctgaagatgaccgcattgaagagcggagaagg
agcaagaaatacaaaggggatgaagagaacggcgggagcaggagggatgtagacagagac
cgtgaccatggccgtagccgtgaggagaggtcttcccggtctgagcgtcacagaagtagt
ggtagggatggagagagagacgtcgagagagaaagagaaagggatcgtcggagaagcagt
agggatggcgacagagagaggagttccagggggagggataaggacgaagataaagataaa
gaaagggagaggagagacagagacagagatagagatcgagagaagagggataaggaaagg
gaaagagaaagagaaagggaaagggagagagaaacgtctagaaggagccgcagtcactca
aggcttgaacgtgaacgagagaaggaattgatacgagagagagaaagagaactcgaatca
agagagagcaggagacttaaagataagaaagatgcagtagagccagaagcagaccctgaa
agggatcaaagaaccgtttttgcttaccagatgccattgaaggcaactgaatgggatgtt
tacgagttcttttctaaagcaggaaaggtgagagatgtgagattgatcatggataggaat
tcaagaagatcaaaaggagtcgggtacattgagttttatgatgcaatgtcagtgccaatg
gcaattgccctttctggtcatttacttctagggcagcctgtgatggtgaagccttcagag
gctgagaagaatcttgttcagtctaccgccacaagtggggcggcaggtggtggtgctgga
gcctttggggcagttgaccgaaagctttatgttggaaatcttcacttcaacatgactgag
ttgcaactcaaacagatttttgaagcttttggtccagttgagcttgttcaactccccact
gaccctgaaacagggcactgtaaaggttttgggtttgttcaatttgctcaacttgagcat
tcgaaagcagcacaaagcttgaatgggaagcttgagattgctggtcgaactattaaggtg
tcttcagttactgatcatgttactgcacaagacacaggagcaaaagcagcagactttgat
gatgatgatggtggaggtttggcactaaatgctcaatcaagagctatgcttatggcaaaa
cttgatcgcagtggtattaccacaggtattcctggggctatcggagcacctatagttaat
ggatctggtccaattcaaggaggtggtttaggcatgaatgtggcagcagcagcagcagct
acaattccaattttgcccccacaaattgtctcagagccaattggaaaccctagtgagtgt
ttgctgctaaagaatatgtttgaccctgctactgagagtgatccagaatttgatttggac
atcaaagaggatgtgggagaagaatgctctaactatggaagggtgaagcatatttatgtt
gataaggaaagtgctggctacgtgtatctacgatttgagagtgtggaggcagcctcacga
gctcaacaggcaatgcataaaagatggtttgcccgcagattgatttcagccattttcttg
caaccatatgaatatgaggccaagttcaaaggtgttgctgcttga
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