Lactuca sativa (garden lettuce): 111917582
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Entry
111917582 CDS
T05352
Name
(RefSeq) F-box/LRR-repeat protein 3
KO
K10268
F-box and leucine-rich repeat protein 2/20
Organism
lsv
Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lsv04121
]
111917582
Ubiquitin system [BR:
lsv04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
111917582
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DUF7885
LRR_6
LRR_4
LRR_At1g61320_AtMIF1
F-box_5
F-box
F-box-like
Motif
Other DBs
NCBI-GeneID:
111917582
NCBI-ProteinID:
XP_023769015
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Position
8:complement(168127165..168131625)
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AA seq
675 aa
AA seq
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MKKQKCIQEDTETKINPFDFLSEEIVFSILDYLTPNPFDRKSFSLVSKSFYSIESRHRKT
LKPFPRTSNDHRHDQLKKLLKRYPFVTHLDLSLCPRITDGCLSYIANSCGKALKSIDLSR
SRFFTQVGLSYLVSKSVNLVDIDLSNGVHLNDTAAAAVASCRSLERLSLTRCKSLTDIGI
GCIAVGCSNLRVLSLKWCLGVSDLGVALIGVKCKKIRSLDLSHLLISEKCLPSLLKLEFL
EDLILEGCCGINDESLVSLKQGWKSLKMLNMSYCDNVTHVGISSLTNRANCLQNLNMSYG
PLVTLSLSESLQKLSQLQSIRLDGCQVTCSGLKGIGNWCVSLKELSLSKCSGVTDDGLSS
IVKKHTDLKKLDITCCRKITQISIAHVTKSCGSLVSLKMESCTLVPFEAFFLIGQNCHFL
EELDLTDNDVDDEGLKFISKCSQLSVLKLGICMNISDEGLISIGNGCPKLKELDLYRSIE
ITDRGISSIAHGCPSLEIINISYCENITDSSLISLSNCSKLNTLESRGCPRITSLGLKAI
AIRCKQIIKLDIKKCHNVNDSGMIPLAQFSHNLRQINLSYSSVTDVGLLYLASLGCLQSM
TILHMEGLTPVGLAAALFGCGGLMKVKLQSSFRSLLPRLVLEHLEARGCVFHWRDKVFQA
ELDPKCWKLQAEDIE
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagcaaaaatgtatccaggaagatactgaaaccaagatcaacccttttgatttt
ctctcagaagaaatcgttttttcaatcttagactacctcacaccaaacccatttgatcga
aaatcattctctttagtctcaaaatcattctactcaattgaatctcgccatcggaaaacg
ttaaaacccttccctcgtacctctaatgatcatcgtcatgatcaattaaaaaaacttcta
aaacgatacccatttgttacccatctcgatctttccctctgccctcgaatcactgatggt
tgtttgtcatacatagcgaattcttgcggaaaagccttgaaatccatcgatctttctagg
tctaggttctttacacaagtggggctctcgtatttggtttcaaagtctgttaatttggtg
gatatcgatctttcaaatggcgtacatttgaatgacactgcagctgcagctgttgctagt
tgccggagtttggagaggttgagtttgactaggtgcaagtcgttgactgatattggaatt
gggtgtattgcagttgggtgttcgaatttaagggttttgagcttgaaatggtgtttgggt
gttagtgatttaggggttgctttgattggtgtcaagtgtaagaagattagaagcttggac
ctttctcacttgctgatctcggagaaatgcttaccttcacttttaaagttggaatttctt
gaagatttgattttggaaggatgttgtggaatcaatgatgaaagccttgtatccctcaaa
caagggtggaagtcactcaagatgttgaatatgtcgtattgtgataatgtcacacatgtg
ggaatttcttcattaacaaacagagccaattgtctccagaatcttaacatgtcatatggg
ccactagtaactctttcactttctgaaagtctacaaaagctttctcaattgcaatcaatc
cgcttagatggatgccaagttacatgttcgggtctcaaaggcattggaaattggtgtgta
tcgcttaaggagctaagcttaagtaaatgctcgggtgttacagatgatgggctttcatca
attgtgaagaaacacacggatttaaaaaagttagacatcacatgttgtagaaagattact
caaatttcaattgcccatgtgacaaaatcttgtgggtcccttgtttctttgaagatggag
tcgtgtacacttgttccctttgaagctttctttttgatagggcaaaattgtcattttctt
gaggagcttgaccttacagataacgatgttgatgatgaaggcctaaagtttatctcaaaa
tgttctcaactctctgtcttaaagcttggaatatgtatgaatataagtgatgaagggctt
atttctattggaaatggatgcccaaaacttaaagagctcgatttatacagatcaattgaa
atcacagatagggggatttcttctattgctcatggttgcccttcccttgaaatcatcaac
atttcttattgtgaaaacatcactgatagctcattgatctcattgtcaaattgttcaaag
ttaaacacacttgaatcccgaggatgccctcgtatcacatctttagggctcaaagccatt
gcaattagatgcaagcaaatcataaagctagacatcaagaaatgccacaatgtgaatgac
tccgggatgattccacttgctcagttttcacataacctcagacagataaatttgtcgtat
agctcagtgacagatgtagggctgttatacctagctagcttaggatgtttgcagagtatg
acaattcttcacatggaaggtttgactccagttggacttgcagctgcattgtttggatgt
ggaggcctaatgaaagtgaagcttcaatcatcttttagaagtctgctaccacgattagtt
cttgaacacttagaagctcgtggttgtgtttttcattggagagataaagtctttcaggct
gaattggatccaaaatgttggaaactacaagcagaagacattgaatag
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