Lactuca sativa (garden lettuce): 111917626
Help
Entry
111917626 CDS
T05352
Name
(RefSeq) RAN GTPase-activating protein 2
KO
K14319
Ran GTPase-activating protein 1
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
111917626
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsv03019
]
111917626
Messenger RNA biogenesis [BR:
lsv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
111917626
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WPP
LRR_6
LRR_1
LRR_4
Imm9
Motif
Other DBs
NCBI-GeneID:
111917626
NCBI-ProteinID:
XP_023769060
LinkDB
All DBs
Position
5:366687602..366690515
Genome browser
AA seq
521 aa
AA seq
DB search
MESTHGHMRSIKLWPPSQITRQVLVDRIVKNLATPSILSRKYGLLSKEDAEEDAKLIESA
AFVAASQHFDKDPDSDGGSAVQLYAKESSKLMVQVIKRGSRGKDDRETIIPELVTLPSDH
ETVFDISGGRRAFIEAEEAKELLKPLKESGNKYTKICFSNRSFGLPAGHVAASILSAMKD
QLTDVDFSDIVSRRPEPEAVEVMRMLSSALDGSNLNYLNLSNNSLGERGIRAFGDLLKSQ
KNLVELYLMNAGISEHAAKALRELIPSTNKIKILHFHNNVTKDEGAVAISQIVKESPNLE
DFRCSSTRVGSVGGVALSESLQNSTLLKKLDLRDNMFGPQSGVALGRALSVPVKLTEVYL
SHLRLEDEGVTAIVNGLKGSASALEILDLAGNSLTSEAAPAVAACITSKKHSLTKLNLSE
NELKDAGAMVIGVALEGDIGRLNIVDLSSNGIRTGGATALAKAVVGKPEFRMLNINGNFL
SNKGVEDVREIFKNSPRMLGSLDDNDPNGKDDDDGDNNQDA
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atggagtcaactcatggtcacatgcgttcaatcaagctatggcctcctagccaaatcacg
aggcaagttcttgtggatcgtattgtaaaaaatctggcaaccccatccattctatcaaga
aaatacggtctcctaagtaaagaagatgcagaagaagacgccaaattaatcgagtctgca
gcttttgttgctgcaagccaacactttgacaaagaccccgatagcgatggaggatccgct
gtgcaactctacgctaaagaatccagtaaacttatggtacaagttatcaaaagagggtcc
agaggaaaagatgaccgggaaaccatcatcccggagttggtcacacttccatcagaccac
gaaactgtttttgacatctccggtggccggagagccttcattgaagcagaagaagctaaa
gaactactgaaaccattgaaagagtctggaaacaaatacacaaagatatgttttagcaac
cgaagcttcggtttacccgctggacatgttgctgcatcgattctgtcagccatgaaagat
cagttgacggatgttgacttctccgatatcgtttcgaggaggccggagcctgaagctgtt
gaagttatgagaatgttatcttcagccctcgatgggtcgaacctaaactatctgaatctt
tcaaataattcattgggtgaaagagggattcgagcattcggggatttattaaaatctcaa
aagaatctcgtcgaattatatctgatgaacgctggaatctctgaacacgctgcaaaagca
ttacgcgagttgattccttctacaaataaaattaaaatccttcattttcacaacaacgta
actaaagacgaaggtgcagttgcaatctctcaaatcgtgaaagaatcaccaaatcttgaa
gatttcagatgctcctccactcgggtcgggtccgtaggtggggttgcgttatccgaatca
ctacaaaattctacccttctgaagaaactcgatttacgtgacaacatgttcggacctcaa
tccggcgtcgcacttggccgggctctttccgttccggtgaaactcaccgaggtttacctc
agtcacttgcgtttggaagacgaaggagtcaccgccattgtaaacggtctgaaaggttcc
gcttccgccctcgaaatcctcgacctcgccggaaacagcctcacttctgaagcggctcct
gctgtggctgcgtgtataacttcaaagaaacattctttaacgaaactaaacttatcggaa
aacgaattgaaggatgcaggtgctatggtgatcggggtggcgcttgagggtgatattggg
cggttgaatatagtcgatttgagtagcaacgggatcagaacaggtggcgccaccgcattg
gctaaagcggttgtggggaaaccggagtttaggatgctgaatatcaatgggaactttttg
tctaataaaggggttgaagatgttagagagatcttcaagaactcaccacgtatgcttgga
tctcttgatgacaatgatcctaatggaaaagatgatgatgatggtgataacaatcaagat
gcttga
DBGET
integrated database retrieval system