Lactuca sativa (garden lettuce): 111917665
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Entry
111917665 CDS
T05352
Name
(RefSeq) RGG repeats nuclear RNA binding protein A
KO
K13199
plasminogen activator inhibitor 1 RNA-binding protein
Organism
lsv
Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lsv03041
]
111917665
Spliceosome [BR:
lsv03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
111917665
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HABP4_PAI-RBP1
Stm1_N
DUF6270
Motif
Other DBs
NCBI-GeneID:
111917665
NCBI-ProteinID:
XP_023769100
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All DBs
Position
3:complement(276498678..276501544)
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AA seq
387 aa
AA seq
DB search
MATANPFDLLGDDDNDDPSQLVQKIVSAPAKKAQPAAPAGKTAAPPAKPSAKLPSKPLPP
AQAVRESRNEGGYGGRGGGGGGGRGYGRGRGGGGGFNRDSSNNEGGFGNRGFSGGGGGGG
EEADGKSFERRNAGSLGGYGGSRGGYRGGRGGSFGNGDSEEGERPRRTYERRSGTGRGNE
FKREGAGRGNWGTQADDINREIEEAVIEGEKTVVSEKPNAEEEAVDGKKENPANERVEEP
ENKEMTLEEYQKVLEEKRKALESLKTEERKVEVDKELASMQQLSNKKTNDDVFVKLGSEK
DKRKEIAEKEERAKKSLSINEFLKPAEGERYYNPGGRGRGRGGARGGGSGGGGRFSGGGG
GGGGSSNYAPEAPKIEDPSHFPTLGGK
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atggccaccgcgaaccctttcgatttgctcggagacgatgacaacgacgacccttcacaa
cttgtgcaaaagatcgtttctgcgccggcgaagaaagctcaacccgctgctcccgccggt
aaaaccgcagcgccgccggctaagccttcggccaaacttccctctaaacctctccctcca
gctcaagccgtgagagaatcaagaaacgaaggcggttatggcggccgtggtggtggtggt
ggtggcggccgtgggtatggccgtggccgtggtggtggtggaggattcaatagagattca
tcaaacaacgagggtggttttggtaatcgtggattttccggtggtggtggtggtggtggt
gaagaggcggatggtaaatcttttgagagacgtaacgctggtagtcttggtggttatggt
ggttctcgtggcggttaccgtggcggccgtggtggttcttttggtaatggagactcagag
gagggtgaacgtcctcgccggacatatgaacgccgtagtgggaccgggcgcgggaatgaa
ttcaaacgcgagggagctggtcgtgggaactggggaacacaagctgatgacatcaatcgt
gaaattgaggaagcagtgattgaaggtgagaaaaccgtggtttctgaaaagccaaatgct
gaagaagaagcagttgatgggaagaaagagaatcctgcaaatgaacgtgtggaggagcct
gagaataaggaaatgacacttgaagaatatcaaaaagttcttgaggaaaaaagaaaagct
cttgagtcactaaagactgaagaaaggaaagtggaagttgacaaagagcttgcatccatg
cagcagctttccaacaagaaaaccaacgatgatgtttttgttaaattgggttctgagaaa
gataaacgtaaagagattgctgagaaagaagagagggctaaaaagtcactcagcatcaac
gagttcttgaaacccgctgaaggcgaacgatattacaaccctggcggccgtgggcgtgga
cgtggcggtgctagaggtggcggcagtggtggtggtgggcggtttagcggtggtggtggt
ggtggtggtggttcgtcaaactatgcaccggaagctcctaaaattgaagacccgagtcac
ttcccgacactggggggcaagtga
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