Lactuca sativa (garden lettuce): 111917988
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Entry
111917988 CDS
T05352
Name
(RefSeq) putative ribosomal RNA-processing protein 12
KO
K14794
ribosomal RNA-processing protein 12
Organism
lsv
Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lsv03009
]
111917988
Ribosome biogenesis [BR:
lsv03009
]
Eukaryotic type
90S particles
Other 90S particles
111917988
Pre-60S particles
Other pre-60S particles
111917988
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_RRP12_N
RRP12_HEAT
DsbG_N
Motif
Other DBs
NCBI-GeneID:
111917988
NCBI-ProteinID:
XP_052623899
LinkDB
All DBs
Position
9:complement(20794989..20802158)
Genome browser
AA seq
990 aa
AA seq
DB search
MEQSTTSLTGESDILEHIADRYKKSRSPHHRQLYAAAAYTQCMIKSKSLPVTPLNYFVNI
IDALYDSSYSHTLSNSTFNADAMSGMSSFLTFVLTMVPEKSISMSKAAEAVEIVVKCLEV
EFVSLRVLRFMECLRVLLEICDLGDWDIVKLSFQTFIKYAVDNKNEKVRKCAEHCVLKVF
KCFQNSIIKESATKLVLDTFRNYILAVEKADGSKDDEGSKCEHLKALHMLDLLKRFIPFL
TKPEDMQEVILELQKCMTAKFSTLYVLDVMEEILALIESESELTFVKTVKISDKWKSDYS
ILIQSITGLLICEATAARASNILKEMFSRVLFSEVELNAESEQSNLVRCLCDSLLEVLRT
YPNEHSLSVISALFLHLGLDSFIYMDRIFMKTVGFMSDASTCDVKHFEQCIGSAVMVMGP
DKIHTLYPLSFDANEQTCSNTWLLPIYKEYVIYSHVRFFIRTIVPLSESFRKACKRGKKM
AVKRKQMQSLSRTCWELLPSFCRYPHDLEESFGSLAEILIPNIKENASMLESIAIALQCL
VKQNMSLSLSFPGSSGVIDMGIEKENAERNIKVMASWSEALLKAFTNVFFQVSPEKRSFL
KETIGCLANIAEFPTSKAIFISSLERVKPDVSDQKNANIGLIHELASAIVADVGMDPIDF
IYCCIGDCLKEDDEEAYANLYILLESFEFMSSRFEQLVDLLRDLKSPVDIISFRWRFLCL
KTLLFHSFERTCDGENKYGVWVLNEIIVTLKDDKEDRREVAHDILLDTSSIMQSKPETYY
KFITMMMGYLFGFSPCITSGAILALSIMLSNDSKICELKPDLVPEILELLDREEDIQVAE
AVLWFLKMLVLSLEVAELKMVLCDILNGLQSWSFVSDLPEILLLERGDFRNVFEICTTSL
EEGKETSRSPQHDFKANVNEIFENIVQKCGSASVESLVPEKYRLGFRICLESAPSSPEEG
KANEALRALITSMFVSSQEEGFCCRQQLGT
NT seq
2973 nt
NT seq
+upstream
nt +downstream
nt
atggagcaatccactacctcattaaccggcgaatctgatattcttgaacatattgccgac
cgttacaagaaatcccgctcacctcatcaccgccagctctacgcagctgctgcctatacc
caatgtatgataaaatctaaatctttgcccgtcactccgctcaattacttcgttaacatc
attgacgccctctatgattcctcatattctcataccctctctaattcaacctttaatgct
gatgcaatgtctggaatgtcttcgtttttgacatttgtgttgactatggttcctgagaag
tctatatccatgtctaaggcggctgaggctgtcgagattgtggttaaatgtttggaggtt
gagtttgtgagtttgcgggttttaagatttatggagtgtttgagggtattgctggagatt
tgtgatttaggagattgggatattgtgaaattaagtttccagacgtttatcaagtatgca
gtagataacaaaaatgaaaaggttagaaaatgtgctgaacattgtgttttgaaggtcttc
aagtgtttccaaaattctattatcaaagaaagtgcaaccaaattggtgttagatacattt
agaaactatatcttggcagttgagaaagcagatggatctaaagatgatgaaggatcaaaa
tgtgaacacttgaaggctcttcacatgttagatctgttgaaacgtttcattcctttttta
acaaaaccagaagacatgcaggaagtcatactagaattacaaaagtgtatgactgccaag
ttttcaacattgtatgttttagatgtaatggaggagatacttgctctcattgaatctgaa
tccgaacttacatttgtaaagaccgtgaagatttcagacaaatggaaaagtgattattcc
atactcattcagtctataacaggtcttttgatatgtgaggctactgctgcaagggcttca
aatatcttaaaagaaatgttttcccgtgtacttttcagtgaagtggaacttaatgctgaa
tctgagcaatcaaatctagtgagatgcttatgtgattcacttttagaagttctgaggacc
tatccaaatgaacattctttgagtgtcatctctgctttatttctccatcttgggttagac
tcttttatctacatggacaggatttttatgaagactgttggttttatgtcagatgcatct
acttgtgatgtaaaacattttgagcagtgtatcgggtctgccgtaatggttatgggcccc
gataaaatacacacattgtatcctctctcgtttgatgcaaatgagcagacttgctcaaat
acttggttgttacctatctataaggagtatgtcatatattcacatgtgcggtttttcatc
agaactatagtgcctctatctgaatccttcagaaaagcgtgtaaaagaggtaaaaagatg
gcagtaaaaagaaagcagatgcagtccctttcacgtacttgttgggaattactaccttct
ttttgtcgctatccgcatgatttggaggaaagttttgggtccttggctgagattttaatt
ccaaacatcaaagaaaatgcctctatgcttgagagcattgctattgcactgcagtgtctt
gtgaagcaaaacatgagcttaagtttgagtttccctggaagttccggagttatagatatg
ggaattgaaaaagaaaacgcagagagaaacatcaaggttatggcatcatggtcagaggca
ttattgaaggcttttaccaatgttttctttcaggtgtcgcctgagaaacgttcttttcta
aaggaaacaattggatgcttagcaaatatcgctgaattcccaacatcaaaggcaattttt
atttcatctcttgaaagagtgaagccggatgtttctgatcagaaaaatgccaacataggt
ctgatacatgaactagcatcagcaattgttgctgatgttggaatggatccaatagatttt
atatactgctgtataggggattgtttgaaggaagatgatgaggaagcgtatgccaatctt
tacatacttttggaatcttttgagttcatgtcttcaagattcgagcaacttgtggatttg
ttacgtgatttgaagtcccctgtcgatataatttcatttagatggaggtttttgtgctta
aagaccttgctatttcactcattcgagagaacttgtgatggagagaacaagtatggcgtt
tgggtgctcaatgaaatcattgtgacactaaaagatgacaaggaggataggagagaagtg
gcacatgacattcttctagatacaagttccatcatgcaatccaaaccagaaacttattat
aaattcatcaccatgatgatggggtatctctttgggttttctccttgcattacaagtggt
gcaatccttgcattgtctattatgttatccaacgactcaaaaatctgcgaattgaagccc
gatcttgtgccagaaatccttgagttgctggatagggaagaagacatacaagttgcagaa
gctgttttatggtttctaaagatgctggttttgagccttgaagtggcagaactgaagatg
gtcctatgtgatattctgaatggacttcaatcttggtcatttgtgagtgaccttccggag
attttgctgctggaacgtggtgattttaggaatgtgtttgagatttgtacaacttccctg
gaagaaggcaaggaaacaagcagatcacctcaacatgatttcaaagcaaatgtgaatgaa
atttttgaaaatattgtgcaaaaatgtggttctgcatcagttgaatctcttgtacctgag
aaataccgcctaggttttaggatatgtttggagagtgctccaagttcccccgaagaaggc
aaggcgaacgaggcactcagagcactaattacttctatgtttgtgtcatctcaagaagaa
ggcttttgctgtagacaacagttgggaacataa
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