Lactuca sativa (garden lettuce): 111918012
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Entry
111918012 CDS
T05352
Name
(RefSeq) syntaxin-61 isoform X2
KO
K08500
syntaxin of plants SYP6
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
111918012
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lsv04131
]
111918012
Membrane trafficking [BR:
lsv04131
]
SNARE
SNAP-25[C] (Qc)
STX6
111918012
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Gene cluster
GFIT
Motif
Pfam:
STX6_10_61_N
SNARE
MCU
DUF3394
Zw10_N
Orf78
Motif
Other DBs
NCBI-GeneID:
111918012
NCBI-ProteinID:
XP_023769429
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Position
9:complement(77847856..77850203)
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AA seq
246 aa
AA seq
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MSSAQDPFYIVKEEIQESIDTLQATFHQWEHTPVASGAQTRLIKELLSNCESIEWQVDEL
EKAISVAARDPAKYGIDQPELERRFKWTRTARTQVVSVKKSVMGTDLNGSSSSTFSGMRQ
ELMSLPSPRQQDRASHYIAKDHDDFISSESDRQMLLVRQQDEELDELSESVQRIGSVGLT
IHDELHAQEKLLEELGSEMDSTSNRLDFVQKKVAVVMKKASAKGQMMMILFLIILFIVLF
VLVFFT
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctgctcaagatccattttacattgtgaaggaagaaatccaggagtctattgat
accttacaagctacttttcatcaatgggaacacacccctgtagccagtggggcccaaacc
cgactaataaaagaactcctttccaattgtgagagtattgaatggcaggtggatgaattg
gagaaagctatttctgtagcagctagagaccctgctaaatatggaatcgatcaacccgaa
cttgaaagaagatttaaatggacaagaactgctaggactcaagtggtgagtgttaagaaa
tcagtgatgggaacagacttgaatggcagtagctcttccacattcagtgggatgcgtcaa
gaactaatgagcctgccaagtccacgtcagcaagacagagctagccattatattgctaaa
gatcatgatgatttcatttcttcagaatccgatagacaaatgcttttagtcaggcaacaa
gatgaagagctggatgagttaagtgaaagcgtccaaagaattggatctgttgggcttacc
atacacgatgaactccatgcacaggagaaacttctagaagaattgggttccgagatggat
agtacatccaatcgtcttgattttgtccagaaaaaagtggcggtagtgatgaagaaggct
agtgcgaagggacagatgatgatgatcttgttcttgatcattctgtttattgttttgttt
gtgttggtttttttcacctag
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