Lactuca sativa (garden lettuce): 111918223
Help
Entry
111918223 CDS
T05352
Name
(RefSeq) probable E3 ubiquitin-protein ligase ARI2 isoform X1
KO
K11968
ariadne-1 [EC:
2.3.2.31
]
Organism
lsv
Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lsv04121
]
111918223
Enzymes [BR:
lsv01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
111918223
Ubiquitin system [BR:
lsv04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
111918223
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ariadne
IBR
UBA_ARI1
IBR_2
Rcat_RNF216
IBR_1
zf-RING_2
crAss001_48
Motif
Other DBs
NCBI-GeneID:
111918223
NCBI-ProteinID:
XP_023769658
LinkDB
All DBs
Position
9:complement(199749859..199754193)
Genome browser
AA seq
595 aa
AA seq
DB search
MEVEDCMSSGGEEDYYCSDRDSLDDALENEDSDSQWAPPKGSSSKVITKESLLAAQREDL
RRVMELLSLREHHARTLLIHYRWDVEKIFAVLVEKGKDRLFKEAGLPMLHSHDLDPSVST
CTTMCDICMEDLPSSEQTKMDCGHCFCNNCWTEHFIVKINEGQSKRIRCMAHKCYAICDE
SIIRNLVGKRHPDLVEKFDRFLLESYIEDNKMVKWCPSTPHCGNAIRVEEDEFCEVECSC
GNQFCFSCLCEAHSPCSCAMWALWTKKCKDESETVNWITVHTKPCPKCHKPVEKNGGCNL
VSCICGQAFCWLCGGATGRDHTWSNITGHSCGRYKEDREKKSERAKRDLYRYMHYHNRYK
AHTDSFKQESRLKETIKEKVRILEEKDSRLRDFSWVTNGLYRLFRSRRALSYSYPFAFYM
FGEELFKDEMTKEDMEIKQHLFEDQQQQLETNVEKLSKFIEEPFDQYPEDRIMEIRMQVI
NLSVITDTLCKKMYECIETDLLGSLQFGIHNIAPYYSKGIEKATELSIAFHANSCNNDKR
QKLHDPTTTNGGTSEESDRPSGSGSSEESGFSAQKRARKDGHGRGMFDLNLPADV
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atggaagtggaggattgcatgagcagcggcggagaagaggattactattgctccgatcgt
gactccctcgacgatgcgctcgagaacgaagactctgattctcagtgggctcctcctaaa
ggttcatcatccaaggtcatcacaaaagagtctcttttggctgcacagagggaagattta
cgcagagttatggagttactttctttaagggagcaccatgcacgtacactacttatacat
tatcgttgggatgttgagaagatatttgcagtgcttgtagagaagggaaaagatcgttta
tttaaagaggctggcttacctatgcttcactctcatgaccttgatccttcagtgtctact
tgtacaacaatgtgtgatatatgcatggaggatttgccatctagtgagcagacaaaaatg
gactgtggccactgcttttgtaacaattgttggacagagcatttcattgtaaaaataaac
gagggacagagtaaacgtatccgatgcatggcccacaaatgctatgcaatatgtgatgaa
tccataatccggaatctagttggcaaaaggcatccggatttggtagaaaaattcgatcgg
tttcttctcgagtcatatatcgaggacaataagatggtgaaatggtgtccaagcactcct
cattgtgggaatgcaatccgtgttgaagaagatgagttttgtgaagtggaatgttcatgt
gggaatcaattctgtttcagttgcttatgtgaagcccattccccttgctcatgtgcaatg
tgggcactctggactaaaaaatgtaaggatgaatcagaaacagttaattggattacagtt
catacaaaaccatgtccaaagtgtcacaaaccagttgagaaaaacggtggctgcaattta
gttagctgcatctgtggacaagccttttgttggctatgtggtggtgcaacggggcgcgat
cacacgtggtcaaacatcacaggtcacagctgcggtcgatacaaagaagaccgcgaaaag
aaatcggaacgcgcaaaacgagacctctaccggtacatgcactaccacaatcgctacaaa
gctcacacggattcattcaaacaagaatcaaggctcaaagaaaccattaaagaaaaagta
agaatcttggaggagaaagattcacgcctacgagacttcagttgggttacaaacggactt
tatcggttgttcagatcaaggcgagcgctttcctattcatacccttttgctttttacatg
tttggtgaagagcttttcaaagatgaaatgacgaaagaggacatggagattaaacagcat
ctgtttgaggatcaacaacagcaacttgaaaccaatgttgagaagctgtcaaagtttatt
gaggaaccgtttgatcagtaccccgaggatcggatcatggagatacggatgcaagttatt
aatctctctgtcatcaccgacaccttatgcaagaaaatgtatgaatgtatagagacggat
ttattgggctccctacaattcgggatccataacatcgctccatactactcaaaaggaatc
gaaaaggctacggaactttccatcgctttccatgcaaactcatgcaacaatgacaagcgt
caaaagctccatgaccccacaacaaccaatggtgggacatcggaggagtctgaccggcct
tcggggtcgggcagctcagaggagagtggtttttctgctcaaaagagggctagaaaagac
ggtcatggtcgtggtatgtttgacctgaatttacctgctgatgtttga
DBGET
integrated database retrieval system
