KEGG   Lactuca sativa (garden lettuce): 111918259
Entry
111918259         CDS       T05352                                 
Name
(RefSeq) uncharacterized protein LOC111918259
  KO
K24739  WD repeat-containing protein 13
Organism
lsv  Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:lsv00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:lsv04990]
    111918259
Domain-containing proteins not elsewhere classified [BR:lsv04990]
 Other domain-containing proteins
  WD40 repeat (WDR) domain-containing proteins
   111918259
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_THOC3 Beta-prop_WDR3_1st WD40_CDC20-Fz Beta-prop_EML_2 WD40_WDHD1_1st WD40 WD40_Prp19 Beta-prop_WDR36-Utp21_2nd WDR55 Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd EIF3I Beta-prop_IFT140_1st ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR3_2nd Beta-prop_RIG_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_HPS5 Beta-prop_WDR35_TULP_N WD40_MABP1-WDR62_2nd Beta-prop_WDR75_1st Beta-prop_EML WDR90_beta-prop_4th Beta-prop_WDR19_1st Beta-prop_Aladin WD40_Gbeta Beta-prop_TEP1_C Beta-prop_Vps41 Beta-prop_SCAP KNTC1_N Beta-prop_IFT122_1st Beta-prop_NUP159_NUP214 Beta-prop_VPS8
Other DBs
NCBI-GeneID: 111918259
NCBI-ProteinID: XP_023769718
LinkDB
Position
9:197585496..197589694
AA seq 486 aa
MNQMMEKCSSDNEDPEKKQKEKEDVTADPEFFSCMLQPCSANSDPNYIGARRLLLSRKAR
SGVLQRKDWRCNGKGYVGYRNFITKLENRMKLQSPSHLSSPGTSGQWAPSSGPASITHDI
DSWSFSRDPSESQTVSRTNSIRSNLSETDHSRRKTEPAYSFVGMHCIFDECKSMVTVIKF
GNMSSDLLAFGATDGTLSVCTVSEPPSVMKKLIGHSKDVTDFDFTMNNHYIASSSLDKTV
RVWDIPKGLCIRVIYGVAPQLCIRFHPVNNNFLSVGNANREISVLNFSTGRLTDKIVVDS
KVTAMDYDNTGQFIFCGDAHGYLYTVSVNSHQGTLSRSHRARNSSKSKSEITTIQYRTFS
LMTRGPVLLSFSRDGTLSFFSVSLELQGYLTLLCSLKLAQRIHSIRASFCPLLSLEKGEF
IVAGSEDASVYFYDLTRPKHACVNKLQGHGCPVIGVAWNHGENFLASSDYSGTVIVWKRA
KTDDKK
NT seq 1461 nt   +upstreamnt  +downstreamnt
atgaatcagatgatggaaaaatgttcttctgacaatgaagatccagagaaaaagcagaag
gaaaaagaggatgttactgcagatccagaattctttagctgcatgcttcagccatgttcc
gcgaactccgatcctaattacatcggggcccgccgtcttctactatctcgcaaggctcga
tccggtgttcttcagcgaaaggattggagatgcaatggcaaaggctatgttggttatcgc
aattttattaccaaattggagaatcgaatgaagttgcagtcacctagccacctgagtagt
cctggaaccagtgggcaatgggcaccatcttcaggtccagcctccattacacatgacata
gacagctggagttttagcagggatccaagtgaaagccaaacagtgagtcgcacaaacagt
ataagatcaaatttaagtgaaactgatcattcacgtagaaaaactgaaccagcatattct
tttgtgggaatgcattgcatatttgatgaatgcaaatccatggttactgttataaagttt
gggaatatgagctctgatttacttgcatttggagcaactgatggaactttgtcagtttgt
actgtttctgagccaccttcagttatgaagaagttaattggtcactcaaaagatgtcaca
gattttgacttcacaatgaacaatcattacattgcatcatcttcactggataaaactgtg
agagtgtgggatataccaaagggcctttgcattcgagtaatttacggagttgcccctcag
ctatgtatccgatttcaccctgtgaataataacttcctttcagttggcaatgcaaacaga
gaaatttcggtattgaattttagcacaggaagattaacagataaaatagttgtggacagc
aaggttactgcgatggattatgacaatactgggcaatttattttttgtggggatgcacac
gggtatctatatacagtatctgttaactcccatcaaggtaccttatctaggtcccatcgt
gctagaaatagtagcaagagtaaatctgaaatcactactatccaatatagaactttctct
ctcatgacacgtggccctgttttgctctctttttcaagagatggaactttgtctttcttc
agtgtttctttggaattacaagggtatttgacattactatgctcactaaaactggctcaa
agaattcatagcattcgggcttctttttgccctttgctttctcttgaaaaaggagaattt
atagttgctggaagtgaagatgcgtctgtttacttctatgacttaactcgaccaaagcat
gcatgcgttaacaagttacagggacatggatgtccggttatcggggttgcctggaatcat
ggtgagaattttttggcctcctcggactacagtggcactgtcattgtgtggaagagagca
aagacagatgacaaaaagtag

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