Lactuca sativa (garden lettuce): 111918476
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Entry
111918476 CDS
T05352
Name
(RefSeq) coatomer subunit gamma-2 isoform X1
KO
K17267
coatomer subunit gamma
Organism
lsv
Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lsv04131
]
111918476
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lsv04147
]
111918476
Membrane trafficking [BR:
lsv04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
111918476
Exosome [BR:
lsv04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
111918476
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
COP-gamma_platf
Coatomer_g_Cpla
Cnd1
HEAT_2
Arm
TOR1L1_N
PDS5
UNC45-central
Motif
Other DBs
NCBI-GeneID:
111918476
NCBI-ProteinID:
XP_023769904
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Position
5:266763612..266771574
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AA seq
885 aa
AA seq
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MAQYVKKDDDRDEEAEYSPFSGIEKGAVLQEARVFNDPQLDSRRCSQVITKLLYLLNQGD
TFTKVEATEVFFSVTKLFQSKDIGLRRMVYLIIKELSPSADEVIIVTSSLMKDMNSKTDV
YRANAIRVLCRITDGTLLTQIERYLKQAIVDKNPVVASAALVSGIHLLQTNPEIVKRWSN
EVQEAVQSRAALVQFHALGLLHQIRQNDRLAVSKLVTSLTKGTVRSPLAQCLLIRYTSQV
IRESSMNSQPGDRPFYDYLESCLRHKSEMVIFEAARAITELSGVTSRELTPAITVLQLFL
SSSKPVLRFAAVRTLNKVAMTQPMAVTTCNIDMESLISDQNRSIATLAITTLLKTGNESG
VDRLMKQITNFMSDIADEFKIVVVDAIRSLCLKFPLKFRTLMNFLSNILREEGGFEYKKA
IVDSIVTIIRDIPDAKEGGLLHLCEFIEDCEFTYLSTQILHFLGIEGPKTADPSKFIRYI
YNRVILENATVRASAVSTLAKFGAMVDSLKPRIFVLLRRCLYDNDDEVRDRATLYLNTLG
GDGSVVETDKDVKEFLFGSLDLPLVNLETSLKNYEPSDEPFDINSVSREVKSQPFAEKKA
QAKKPTGLGAPPAGPTSTVDTYEKLLLSIPEFSTFGQLFKSSAPVELTEAETEYAVNVVK
HIFDKYVVFQYNCTNTIPEQLLENVTIVVDASEAEEFEELATKPLKSLPYDTPGQTFVAF
EKPEGVPSIGKFSNVLRFIVKEVDPSTGEAEEDGVEDEYQLEEFEVVASDYMLKVGVSNF
RNAWESLSPDFERVDEYGLGPRESLKEAVNTVINLLGMQPCEGTEVVAANSRSHTCLLSG
VYIGNVKVLVRLSFGVDGAKEVAMKLAVRSEDELVSDAIHELVAN
NT seq
2658 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagtacgtgaagaaagacgatgatcgcgacgaggaagcagagtactcccccttt
tctggaatcgagaaaggagcagttcttcaggaagccagggtcttcaatgatcctcagtta
gattcaaggaggtgttctcaggttattaccaagctgctttatcttctgaatcaaggtgat
accttcacaaaggttgaagccacagaagttttcttttcagtaacaaaacttttccagtct
aaagatattggattaagaagaatggtttatttgatcataaaggagctctctccctctgca
gatgaggtcattattgtcacaagttcccttatgaaagacatgaatagcaagactgatgtg
tatcgggcaaatgctattcgtgttctctgtcgcatcacagatgggacacttctgactcag
attgaaagatacttaaaacaagctattgttgacaaaaaccctgtagttgccagtgcagcc
ctagtcagtggtatccatttgctccagacaaacccagagattgtgaaaagatggagcaat
gaggtacaagaagctgttcaatctagggctgcacttgtacagtttcacgcccttggtttg
ctccaccagataagacaaaacgaccgcttagctgtcagcaaattagttaccagcttaaca
aagggtactgttcgttcacctttagcccaatgcctactcatccgttacactagtcaggtt
attagggagtcaagcatgaacagtcaacctggggaccgcccattttatgactatttggaa
agttgtctccgccacaaatcagagatggttatttttgaagctgcaagggcaataacggaa
ttaagtggtgttactagcagagaattgacccctgcaataactgttctacagctcttctta
agttcctctaagccagtacttcgatttgctgctgtccgcacattaaacaaggtggcgatg
actcaaccaatggcagtaactacctgcaacatagatatggagagtctaatttcagaccaa
aacagaagtatcgctacccttgccattaccacacttctgaaaacaggaaatgaatcaggt
gttgatcgtttgatgaaacaaattacaaacttcatgtctgacattgctgacgagttcaaa
attgttgtggttgatgccattcgatcattatgtttgaagttccccttgaaattcagaaca
ttgatgaatttcttaagcaatatattgagagaggaaggtgggtttgagtacaaaaaagca
atcgttgattcaattgttactattattagagatatcccagatgcaaaagagggcggcctc
cttcacctctgtgaattcatcgaggattgtgaattcacatacctttcaacacagattctt
cattttcttggaattgagggaccaaaaacagcagaccctagcaaattcatacgctatata
tataaccgtgtcatacttgagaacgcaactgttcgagccagtgcagttagcactttggca
aagtttggagctatggttgactccctcaagcctcgtatatttgttctgttgaggcgctgt
ttatatgataatgatgatgaggttcgtgacagggctacactatatctgaatacccttgga
ggcgatggttctgttgttgaaactgataaagatgtaaaggaatttctctttgggtcactt
gatctcccattggtcaacctcgagactagtttgaaaaactacgaaccatcagacgaaccc
tttgacatcaattctgtatcaagggaagtcaaatctcagccatttgctgagaaaaaagct
caggctaaaaagcccactggtcttggtgctccgccagctggccccacttcaacagttgat
acttatgaaaagttactcttatcaatcccagagttttcaacttttggacagctttttaag
tcatctgcaccagtggagctgactgaagctgaaacggagtatgcggttaatgttgtcaaa
cacatattcgataagtacgttgtgttccagtacaactgtaccaatacgatccctgagcag
ttattggaaaatgtcacgattgttgtggatgcttcagaagcagaagaatttgaagaatta
gcaaccaagccattaaaatccctgccatatgatacaccaggacaaacatttgtcgcattt
gaaaaaccagaaggtgttccttctattggcaaattttccaatgtcttgaggttcattgtt
aaagaggttgatccctcaaccggtgaggctgaggaagatggtgtggaagatgaatatcaa
ctagaggaatttgaggtggttgcatcagactacatgcttaaagtcggggtctcaaatttc
cgaaatgcatgggaaagcttatccccagatttcgagcgtgttgatgaatatggccttggt
ccaagggaaagcttaaaggaagccgtcaacactgttattaaccttcttggcatgcagcct
tgtgaagggacagaagtggttgcagccaactcaagatcacacacgtgtttgttatcaggt
gtgtacataggcaatgtgaaggtgcttgttcgcttatcctttggggttgatggtgccaag
gaggttgcaatgaaacttgctgtcagatctgaggatgaacttgtaagtgatgctattcat
gaacttgtagccaactag
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