Lactuca sativa (garden lettuce): 111918587
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Entry
111918587 CDS
T05352
Name
(RefSeq) single-strand DNA endonuclease 1
KO
K15338
holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
Organism
lsv
Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lsv03400
]
111918587
DNA repair and recombination proteins [BR:
lsv03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
111918587
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Chromo_SEND1
XPG_I
XPG_N
Chromo_2
Chromo
Motif
Other DBs
NCBI-GeneID:
111918587
NCBI-ProteinID:
XP_023769999
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Position
3:complement(90819629..90823677)
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AA seq
654 aa
AA seq
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MGVKGLWDILDSCKKTLPLHHLQNKRICVDLSCWMVQLNKVNQSHCAMKDKLYLKGLFHR
IRALIALNCSLIFVTDGSIPGIKVTTYRRRLHLDNEGRDESYLNKIIPLQRNMGSEFSCM
IKEAKILASALGVPCLDGVEEGEAQCALLDSESLCDGCFSLDSDIFLFGARTVYRDICLG
EGGYVVCYEMDDIERKLGLGRNSLIALAVLLGCDYGPGVPRLGSEMACKIVKSFSESEVL
QRIATEDLSVLKKANCSKKRNQALGYNNKENIPPNANRCNNNKENMNIPPNGNKNDLPRN
YKFLQVMDAYLTPQCHSADSQTVQRVLGMHSFQRTMLHQTCARFFQWPPEKTDEYILPKI
AERDLRRFANLRHTSSHLGVELPLDKMPVKCPVSGIIKRRKAQGKECFEVSWEEVDGLSS
SIVPAELMERACPEKIMEFEERIAEKKKPKPRNPRPNKKSVNEIDAKLQQLMLEIEGAAS
SDQNYRLLDEPLSNTRSEGGKRTESDQNNENTSFRYQLLDEPLIEVRMRESKKDEKTMYR
LLDEALINTRSNSREGKLKLTENTTTTSCGAAETEVVNLSTPLVDKKSKGKDETEMEIID
LLSPLSVVCSRKHGGGGGGGVDVVELSESETEVSPEHARKARELRLFVASIRND
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atgggagttaaaggattatgggatattctagattcttgcaagaaaacccttcctcttcac
catctccaaaacaagagaatctgcgtagatctatcatgttggatggttcaactcaacaaa
gtaaaccaatcacactgtgccatgaaagataagctttatctcaagggtttatttcatcgc
attagggctctcattgcgttaaattgcagcctcatcttcgtcacagatggatcaattcca
ggcatcaaagtaactacatatagaaggcgtttacatttggacaatgagggtcgtgacgaa
tcttatttaaacaaaattattccacttcaaaggaacatgggctctgaattctcttgtatg
ataaaagaggccaagattcttgcctctgcattaggtgttccatgtttagatggagttgag
gaaggtgaagctcagtgtgcattattggactcagagtcattatgcgatggatgtttctct
ttagactctgatatctttctctttggagcaagaacagtttacagagatatatgccttggg
gaaggtggatatgttgtttgttatgaaatggatgacattgagagaaaacttggattagga
agaaactcattgatcgctttagctgtactccttggttgtgattatggtccgggtgtccct
aggcttggttcagaaatggcatgcaagattgtgaaatcttttagtgaatctgaagttctt
caaagaattgcaacagaagatttgtcggttttaaaaaaggcaaattgttccaagaaaagg
aatcaagcacttgggtacaacaacaaagagaacattccaccaaatgcaaatagatgtaac
aataataaagagaacatgaacatccccccaaatggaaataaaaatgatttaccaaggaat
tataagtttctgcaagttatggatgcatatctcaccccacaatgccactctgctgactct
caaactgttcaaagggttcttggtatgcattcatttcaaaggaccatgcttcaccagaca
tgtgctcgatttttccaatggcctccagagaaaacagatgaatatattcttccaaagatc
gctgaaagagatcttagacgatttgcaaacttacgtcacacttcttctcatttgggagtt
gagcttcctttagacaagatgccagtgaagtgtccggtttctggaataattaagcgaagg
aaagctcagggaaaagaatgttttgaggtttcatgggaagaagttgatggacttagcagc
tctatcgtcccagctgaactcatggaacgtgcatgtccggagaagataatggagtttgaa
gaaagaatagcggaaaagaagaagccaaaaccacgaaatccacgacctaataagaaatct
gtaaacgaaattgatgccaagctccaacaactgatgctcgaaatcgaaggtgcagcttcc
tccgatcaaaactatcggctactcgatgaaccacttagcaacacgagatcagagggagga
aaaaggactgaaagtgatcaaaataacgaaaacaccagtttccgttaccaattactcgat
gaaccacttatcgaagtgagaatgagagaaagtaaaaaggatgagaaaaccatgtaccgt
ttactcgatgaagcactgatcaacacgagatcaaacagccgggaagggaaattgaaattg
acggaaaacactactacaacgagttgtggcgcggcggagacggaggtggtgaacctgtcg
acgcctttggttgataagaaatcgaaggggaaagatgaaacggaaatggagatcattgat
ttgttgagtccgttatctgttgtttgctcgaggaagcatggaggaggaggaggaggaggt
gttgatgtggttgagttgagtgagtcggaaacggaggtatcgccggagcatgcgaggaag
gcgagagagcttagattatttgtcgctagcataaggaacgactga
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