Lactuca sativa (garden lettuce): 111918684
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Entry
111918684 CDS
T05352
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1
KO
K14411
RNA-binding protein Musashi
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
111918684
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsv03019
]
111918684
Messenger RNA biogenesis [BR:
lsv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
111918684
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GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
HAT_Syf1_M
Motif
Other DBs
NCBI-GeneID:
111918684
NCBI-ProteinID:
XP_023770083
LinkDB
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Position
5:273809234..273811520
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AA seq
353 aa
AA seq
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MQSDLGKLFIGGISWDTNEERLHHYFSRYGDVLESTIMKDRATGRARGFGFVVFADPSVA
DRVTKEKHNIDGRMVEAKKAVPRDDKLTMSRNNNISSIKSSPGQTRKIFVGGLASTVTEN
DFKMYFEQFGKVTDAVVMYDHNTKRPRGFGFITYDTQDAVNNVLSKTFHQLNGKTVEVKR
AVPKELSPGPTPTRAILSPYPYGLNRTNSVLNGPIGGYNVGMDSRFGLNSGYGIGMELNF
EPNTLPYGRGLSPYYGDSSRFRSPVSYDGGNGNNISFFSSNPGNLWANGGVDPIRSLVSP
QHGGNGGGFGRNTSGGGYDPPFSDVYGGGGGGSRDLTWGLEGDGIGLFGGFGN
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgcaatccgatcttggcaagctattcatcggtgggatatcatgggatacaaatgaagaa
cgtctacatcactatttcagtagatacggcgacgttttggaatcaacgattatgaaagat
cgagccactggtcgtgctcgtggattcggctttgtagtctttgccgatccttctgttgca
gacagagtcaccaaagagaaacacaacatcgatggcagaatggttgaagcaaagaaggca
gttcctagagatgacaaactcacaatgagtagaaacaataacattagtagcattaagagt
tcacctggacaaacaagaaagatatttgtaggaggtttagcatcgacagtaactgaaaac
gacttcaagatgtattttgagcaatttggaaaagttacagatgctgtggttatgtatgat
cataatacaaaaagacctagaggatttggtttcatcacatatgacacacaagatgcagtc
aacaatgtcttatcaaaaacatttcaccaactaaacggaaaaacggttgaagtcaaacgc
gctgttccaaaagaactctcaccgggtcccactcccactcgagctatacttagcccgtat
ccttatggtttgaacaggactaatagtgttcttaatggaccaattggaggttacaatgtt
gggatggatagtagattcggtttgaattctggatatggaattggaatggagttgaatttt
gaaccgaatactttaccctatggaaggggattgagcccttattatggggattcaagtagg
tttaggagtcctgtaagttatgatggtggaaatgggaacaacatttctttctttagttca
aatcctggtaacttgtgggctaatggaggagttgatcctataaggtctttggtttcccct
caacatggtggtaatggtggagggtttggaaggaacactagtgggggtggttatgatcca
cctttttcagacgtttatggtggtggtggtggcggctcgagagacctgacatgggggttg
gagggagatgggattggtttgtttggtgggtttgggaattga
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