Lactuca sativa (garden lettuce): 111918705
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Entry
111918705 CDS
T05352
Name
(RefSeq) exopolygalacturonase
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv00040
Pentose and glucuronate interconversions
lsv01100
Metabolic pathways
Module
lsv_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
111918705
Enzymes [BR:
lsv01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
111918705
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix
ADNP_N
Motif
Other DBs
NCBI-GeneID:
111918705
NCBI-ProteinID:
XP_023770109
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Position
5:273991346..273993580
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AA seq
411 aa
AA seq
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MAASTSIGLFLFVGFLVARTKAGPIDVKTKGAKGDGVANDAEAIMTAWKEACDSPNPCQV
VIPPGTYMVSSPLTLSGPCKNPIEINANGATLKAPSDPTGIKGPGWIMFKNVDKMTLSGG
IFDGQGQEAWKTNNAAKTGKCDLPYNFRFDMVKASFIRGITSMNSKHFHMNFLGCDGTTV
EKVTIEAPAESLNTDGMHIGRTNGLNITDCTIKTGDDCVSIGDGSSNIHIEKIKCGPGHG
ISIGSLGKYPDEAPIDGIFIKGCTMTGTDNGLRIKTWPGSPPGKAVNMHFDDVQMENVGN
PILIDQEYCPYVGCKPETNSSKVKIADVSFKGIRGTSSTKAAIRLLCSKDIPCEKVELAD
IDLKYEGKEGAGAISECKNVKPMTTGKIIPEACAAPVEPFKEKGGEADSSS
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atggctgcatcaacttctataggtttgtttctctttgtaggatttctagtcgcaagaacc
aaagcagggccaatcgatgtcaaaactaaaggtgccaagggcgatggcgtcgccaatgat
gcagaagcgattatgactgcatggaaagaggcttgtgattccccaaacccatgtcaggtg
gtgatcccaccgggaacatatatggtgtcttctccacttacattatcaggtccatgcaag
aaccctattgagataaatgcaaatggagccaccctcaaagccccatcggatcctaccggc
ataaaaggaccaggttggatcatgtttaaaaatgtcgataagatgactttatctggaggt
atcttcgatggacaaggccaggaggcttggaagacaaacaacgctgccaaaaccggaaag
tgcgacttaccatataacttcagattcgatatggtgaaggcttcgttcattagaggtata
acatcaatgaacagcaaacactttcacatgaattttcttgggtgcgacggaacaaccgtt
gagaaagtgacgattgaagcaccggcggagagtctgaacacagacgggatgcatatcggg
agaacaaatggtctcaacattaccgattgcactataaaaacaggcgatgattgtgtctcc
attggtgatggaagctcgaatatccatatcgagaaaataaaatgtggacctggacatggc
atcagtatcggaagcctgggtaagtacccggatgaagcaccgattgacggaatctttatc
aagggttgcacgatgaccggcaccgataatggtctccggatcaagacgtggcctggttca
ccacctggaaaagcagtcaacatgcatttcgatgatgttcaaatggaaaatgtcggaaac
cctatattaatcgatcaagaatactgcccttatgtcggttgtaaacctgagaccaactcc
tcaaaggtgaaaattgcagacgtttcgtttaaaggaatcaggggtacgtcttccacaaaa
gcagcgattaggctactgtgcagcaaagacataccatgcgagaaggtggagttggctgat
atcgacttgaaatacgagggaaaagaaggagcaggtgccatctcggagtgtaaaaacgtg
aaaccaatgaccaccggaaaaatcatccccgaggcatgtgcagcaccagtagaacccttt
aaagaaaaaggtggcgaagccgatagcagcagttag
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