Lactuca sativa (garden lettuce): 111918723
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Entry
111918723 CDS
T05352
Name
(RefSeq) alpha-L-arabinofuranosidase 1
KO
K01209
alpha-L-arabinofuranosidase [EC:
3.2.1.55
]
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv00520
Amino sugar and nucleotide sugar metabolism
lsv01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
111918723
Enzymes [BR:
lsv01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.55 non-reducing end alpha-L-arabinofuranosidase
111918723
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GFIT
Motif
Pfam:
Alpha-L-AF_C
ASD1_dom
Cyclin_N
Motif
Other DBs
NCBI-GeneID:
111918723
NCBI-ProteinID:
XP_023770119
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Position
8:274317314..274331804
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AA seq
492 aa
AA seq
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MPPPPPPPSTENVALIAAVTAAVTATMAQMSNNGSGGGVNSSMNDQRPGLSRDCTYKDFM
NSKPITFNGAGGIMALSQWIEKTEAVFDICSCPEGNKVKFVACTSSVTEEVHGDPNRHHT
SNVGDSDKFAHISKYIICLILYVYLKFDLMQLVGLTSLLLASKYEDFWHPQTNNDSTTGK
VIELDPNKTLTMRRVVTKQTIGKELLYNFILFTNTMVEQGISHKKSVDPSNIMPFVKEAL
DGIEFARGDPNSTWASVRAAMGHPKPFDLKYVAIGNEDCWLKNYRGNYLQFYAAIQKAYP
DIKMISNCDGSNGPLDHLADMYDFHIYTNASTVFSMANTFYHTSRVGPKAFVSEYTVTGN
DAGSGSLLRALAEAGFLIGVEKNSDVVEMASYAPLFVNTNDRRWMPDAIVFYSSQSYGTP
SYWMQHFFKESNGATLLKSTLQSNSSMSLEASAIVYRDTEDDKNYLRLKAYRDSSLQDCK
KASKAKDVEVFL
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgcctccaccaccaccccctccatcaacggaaaatgtcgcattgatagctgctgtaaca
gctgcagtaacagcgacaatggcccaaatgagtaacaatggatctggtggaggagtgaat
agttctatgaatgaccaacgcccaggtctttcaagggattgtacatacaaggatttcatg
aatagcaaacccattacttttaatggggctggaggaataatggctctatcacagtggata
gagaaaactgaagcagtttttgatatttgttcttgtccggaagggaacaaagtgaagttc
gttgcctgcacatcatcagtcactgaagaagtacatggagatccaaacagacatcacacc
tcaaatgtgggggattctgataaatttgctcatataagtaagtacataatttgccttatt
ctttatgtatatttgaaatttgatttgatgcaattagtcggtctcacatcacttttgtta
gcatccaaatatgaagatttttggcatccacagacgaacaatgactccaccacaggcaaa
gtgattgagttggaccccaataagactcttactatgaggagagttgtcacaaaacaaacc
atcggcaaagagttgctctacaatttcatcttgttcactaatacaatggtggaacaagga
attagccataagaagtctgttgatccctccaacatcatgccttttgtaaaagaagctctt
gatggaattgagtttgctagaggtgatccaaattcaacatgggcatctgttagagctgct
atgggacacccaaagccttttgatttgaaatatgttgctattggaaatgaggattgttgg
cttaaaaattatcggggaaattaccttcagttttatgctgcaattcaaaaagcttatcca
gatattaaaatgatatccaattgtgatggatcaaatggtccattggatcaccttgctgat
atgtatgattttcatatttacacaaatgcaagcactgtattttctatggctaataccttc
tatcatacatcacgtgttgggcccaaggcatttgtgagcgagtatactgtgacaggaaat
gacgctggttctggaagtcttttaagagctctcgctgaagctggattccttattggtgta
gaaaagaacagcgatgttgttgaaatggcgagttatgcacctttgttcgtgaacaccaac
gataggcggtggatgccagatgcaatagttttttattcttctcaatcatatggaacacca
agttattggatgcaacatttcttcaaagagtcaaatggtgcaactcttctaaagtcaact
ctccagtcaaactcatccatgtcacttgaggcttctgctattgtgtaccgagacacagag
gatgataaaaactacttgagactaaaggcatatagggactcctcattgcaggattgtaag
aaagcatctaaagctaaagatgttgaggtttttctctga
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