Lactuca sativa (garden lettuce): 111918753
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Entry
111918753 CDS
T05352
Name
(RefSeq) general transcription and DNA repair factor IIH subunit TFB5
KO
K10845
TFIIH basal transcription factor complex TTD-A subunit
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv03022
Basal transcription factors
lsv03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
111918753
09124 Replication and repair
03420 Nucleotide excision repair
111918753
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lsv03021
]
111918753
03400 DNA repair and recombination proteins [BR:
lsv03400
]
111918753
Transcription machinery [BR:
lsv03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
111918753
DNA repair and recombination proteins [BR:
lsv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
111918753
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb5
Motif
Other DBs
NCBI-GeneID:
111918753
NCBI-ProteinID:
XP_023770141
LinkDB
All DBs
Position
6:14537315..14538631
Genome browser
AA seq
70 aa
AA seq
DB search
MVHAAKGVFISCDIPMAQFIINYNASLPQSQKFIIHILDGTHLFVSSGMEGMIRSAIQEF
REKNTYEKPA
NT seq
213 nt
NT seq
+upstream
nt +downstream
nt
atggtacatgcagcgaaaggagtatttatctcatgtgacataccaatggctcaattcata
ataaattacaacgcttcattgccacaatcacaaaagttcattatacacattttggatgga
actcatctgtttgtaagcagtggtatggaaggcatgataagaagtgccatacaagagttc
agagagaagaacacatatgagaaacctgcttga
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