Lactuca sativa (garden lettuce): 111918760
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Entry
111918760 CDS
T05352
Name
(RefSeq) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
lsv
Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lsv03400
]
111918760
Enzymes [BR:
lsv01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
111918760
DNA repair and recombination proteins [BR:
lsv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
111918760
Prokaryotic type
111918760
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_photolyase
Motif
Other DBs
NCBI-GeneID:
111918760
NCBI-ProteinID:
XP_023770150
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All DBs
Position
6:complement(14277927..14280358)
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AA seq
506 aa
AA seq
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MGTAAAASSLIESTAVQLGRIRVLKEGIHQHLQPSSSSSNVGPVVYWMFRDQRLRDNWAL
IHAVDQANRRNVPVAVAFNLFDQFLGAKARQLGFMLRGLQQLHNEIEQTLQIPFFLFQGE
AVETIPSFLEECGASLLVTDFSPLRQVRRWKEEISKRVSDSVSIHEVDAHNIVPLWIASN
KLEYGARTIRRKINNLLPDYLIDFPELKPQNTIWGSSGNRSIDWVTLIADVVKKGDEVPE
IDWCKPGEASALKTLMGNEKGFLTSRLKNYSTDRNNPLKPEGLSGLSPYLHFGQISAQRC
ALEARKVRKVNPQAVDAFLEELIVRRELSDNFCYYQPQYDSLQGAWDWARNSLMEHALDK
REHLYTKEELEKAQTADPLWNASQLEMVHYGKMHGFMRMYWAKKILEWTSSPQEALEISI
YLNDKYHIDGRDPNGYVGCMWSICGVHDQGWQERPVFGKIRYMNYAGCKRKFNVDGYIAY
VRRLVGNIKKRKGENLLNNKAKQLVS
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atgggcactgccgccgctgcttcctctctaatcgaatccaccgccgtccaattaggcaga
attagggttcttaaggagggaatccaccaacatcttcaaccgtcatcttcgtcatctaat
gtcggtcctgttgtatactggatgtttagagatcagcgattgagagacaactgggcgttg
attcacgccgttgatcaggccaacagacgcaatgtccctgttgcggttgcatttaatctg
ttcgatcagttcttaggcgcaaaagctcgtcaattagggtttatgctacgaggattacaa
caacttcataacgaaatcgaacaaactcttcaaatacctttcttcttattccagggagaa
gcagtagagacgattccaagctttctagaagaatgtggagcatcgcttttggttacagat
ttttcacctctgagacaagttcgtcgctggaaagaagaaattagcaagagagtatctgat
tctgtatcgattcatgaagttgatgcacacaacatagtacctctatggatagcatcaaat
aagttagagtatggcgctagaaccattagacgaaagatcaacaacttgcttcctgactat
ctgatcgattttccagaattaaagcctcagaatacaatctggggttcttctggaaacaga
tccatcgattgggtgacacttattgcagatgtagtaaagaaaggagatgaagttcctgag
atagattggtgcaaaccaggagaagcttctgcgttaaagacattgatggggaacgaaaaa
ggtttcttaacaagtagattgaagaactactctacagatcgaaacaatccattgaaaccc
gaaggactttctggtctttctccttaccttcattttggtcagatttcagctcagcgttgt
gctcttgaggcacgtaaagtacgcaaagttaatccacaggcagttgatgcgttcttggag
gaattgatcgtgcgaagggagttatcagataacttttgttattatcagcctcaatacgac
tctttacagggtgcatgggattgggctcgtaactcactcatggagcatgctttagacaaa
cgtgaacatttgtacacgaaggaggagctagagaaagcacaaactgcagatccactttgg
aatgcttctcagttggagatggttcattatgggaagatgcatggttttatgagaatgtat
tgggcaaagaagatacttgaatggactagtagcccacaagaagccctagaaatatcgatt
tatttgaatgacaagtatcatattgacgggagagatccaaatggatatgttggttgtatg
tggtcaatttgtggggtacacgaccagggttggcaagagcgacctgtttttgggaagata
agatacatgaactatgcgggttgcaagaggaaattcaacgttgatggatacattgcatat
gtgaggagattagtaggaaatatcaagaaacgaaaaggagaaaatttgttaaataacaaa
gcaaaacaactcgtgagttga
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