Lactuca sativa (garden lettuce): 111918794
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Entry
111918794 CDS
T05352
Name
(RefSeq) long chain acyl-CoA synthetase 4 isoform X2
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv00061
Fatty acid biosynthesis
lsv00071
Fatty acid degradation
lsv01100
Metabolic pathways
lsv01212
Fatty acid metabolism
lsv04146
Peroxisome
Module
lsv_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
111918794
00071 Fatty acid degradation
111918794
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
111918794
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
lsv01004
]
111918794
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lsv04147
]
111918794
Enzymes [BR:
lsv01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
111918794
Lipid biosynthesis proteins [BR:
lsv01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
111918794
Exosome [BR:
lsv04147
]
Exosomal proteins
Exosomal proteins of breast milk
111918794
Exosomal proteins of breast cancer cells
111918794
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
111918794
NCBI-ProteinID:
XP_023770186
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Position
6:13383380..13389385
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AA seq
661 aa
AA seq
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MEPEKFIVEVEPAKEAKDGKPSMGPVYRSVFAKDGFPPPIDGLNSCWDIFRLAVEKYPDN
KMLGTREFVNGKHGKYVWLTYKQVYDKVIQLGNAIRACGVEPGGKCGIYGANCTEWIISM
EACNAHGLYCVPLYDTLGAGAIEFIICHAEVTIAFVEEKKINELLKTFPKAGEHLKTIVS
FGQFTPEQREQFSKFGLAIHSWDEFLSLGENKKFDLSVKDKDDICTIMYTSGTTGDPKGV
LISNKNIVTLTAGVRRLLESCNEALTSSDVYLSFLPLAHIFDRVIEECFIYHGASIGFWR
GDVKLLIEDIGELKPTIFCAVPRVLERIYSGLQHKVSSGSYFKYKLFNLAYSYKLHNMKG
GSKHEEASILSDKLVFTKVKQSLGGRVRIILSGAAPLAPHVESFLKVVACCHVLQGYGLT
ETCAGSFVSLPNQMSMVGTVGPPVPNLDARLESVPEMNYDAVSSTPPRGEICIRGDTLFL
GYHKRQDLTKEVLIDGWFHTGDIGEWQPDGSMKVIDRKKNIFKLSQGEYVAVENLENIYG
LVPAVDEIWVYGNSFESYLVAVVIPNKHAVENWASGNNLSEDFTSLCGNPKAKDYILGEL
NRIGKEKKLKGFEFIKAVHLEPVPFDMDRDLLTPTFKKKRPQLLKYYQSTVDDMYKSLNN
K
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atggagccggagaaatttatagtagaggttgagccggcgaaagaagcgaaagatggaaag
ccgtctatgggacctgtttaccgtagtgtgttcgctaaagacggttttccgcctccgatt
gatggtttgaattcatgttgggatattttccgccttgctgtcgagaaatatccggataac
aaaatgcttgggacccgtgagtttgtcaatggaaagcatgggaagtatgtgtggttgact
tacaaacaagtatatgacaaagtcatacagcttgggaatgctatacgtgcttgtggagtt
gagccaggaggaaagtgtggtatttatggtgccaattgcacagaatggataatcagcatg
gaggcatgtaatgctcatggcttgtactgtgtaccattatatgatacattaggtgctggt
gcaattgaatttatcatatgtcatgctgaggttacaattgcttttgtagaagaaaaaaag
attaacgagttgttaaaaacatttccgaaagctggagaacatctgaaaacaattgtgagc
tttggacaatttactcctgaacaaagggaacaattcagtaaatttggtttggcaatacat
tcatgggatgagtttttgtctctgggtgaaaacaaaaagtttgatctgtcagtgaaggac
aaagatgacatttgtacaatcatgtacacgagtggaacaactggtgatcctaagggtgtt
ctgatttccaataagaacatagtcacactgacagctggcgtccggcgtttgctagagtct
tgtaatgaagcattgacttcaagtgatgtgtatctctcatttctacctctagcgcatata
tttgatcgggtgattgaagaatgttttatatatcatggagcttcaataggattttggaga
ggggatgttaaattactgattgaagacattggggagctaaaacctactattttctgtgct
gttcctcgagtcttggagagaatttattcaggtttgcagcataaggtttcttcagggagt
tacttcaaatataaactgtttaatctcgcctactcttataagttgcataacatgaagggc
ggaagtaaacatgaagaggcatcaatattgagtgacaaacttgttttcactaaggtcaag
caaagtctaggtggcagggtccgcatcatcctatctggcgctgctccactcgcgccacat
gtcgaaagctttctcaaagttgttgcatgctgccacgtcctacaaggatatggattgacg
gaaacatgtgctggatcatttgtgtcgctgccaaatcagatgagcatggtgggaacggtg
ggcccgccagtaccaaacctggatgcccgtttggaatctgttcctgaaatgaattatgat
gctgtttcaagtacgccgccacgtggagagatatgcataaggggagacactctgtttttg
gggtaccataaacgtcaagacctcacaaaagaggtcttgattgatggctggtttcataca
ggtgatataggtgagtggcaaccagatggaagcatgaaagtaatcgaccgcaagaaaaac
atttttaagctgtcacaaggagagtatgtggctgttgaaaacttggagaacatttatgga
cttgttcctgctgttgatgaaatatgggtgtatgggaatagcttcgagtcgtatcttgtt
gctgttgtaatcccaaataaacatgctgttgaaaactgggcgtctggaaataatttatca
gaggattttacttctttatgtggaaatcccaaggctaaagattatatactcggagagctt
aatagaattggaaaagagaaaaagttaaaagggtttgaatttattaaggctgtacacctt
gagcctgtaccttttgacatggatcgtgaccttttgaccccaactttcaagaagaaacgt
ccccagttacttaaatattatcagagtaccgttgatgatatgtacaagagccttaataac
aagtga
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