Lactuca sativa (garden lettuce): 111918886
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Entry
111918886 CDS
T05352
Name
(RefSeq) uncharacterized protein LOC111918886
KO
K13091
RNA-binding protein 23/39
Organism
lsv
Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lsv03041
]
111918886
Spliceosome [BR:
lsv03041
]
Common components
Common spliceosomal components
General mRNP proteins
111918886
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_7
Motif
Other DBs
NCBI-GeneID:
111918886
NCBI-ProteinID:
XP_023770272
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All DBs
Position
2:complement(152128368..152132994)
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AA seq
586 aa
AA seq
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MDFDEYDYLEKTVDEADNRNGSSSKAKDGGAEQSEKGYRRRDREEGDEEDDRIVEEDRKS
KKSKGEEENGSRRDRERDREERSSRSERHRSSGRDSERDVDRERDRRRSSRDGERDRDRE
RSSRDREKDKERDRERSSRDKDKDREKEKKDRERDREKREREREKERERSRRSRSHSRLE
REREKELLREKERELESRESRRLKDKKEAEPEADPERDQRTVFAYQMPLKATEYDVYEFF
SKAGKVRDVRLIMDRNSRRSKGVGYIEFYDAMSVPMAIALSGHLLLGQPVMVKPSEAEKN
LVQSNATAGGTGGIAGPYGAVDRKLYVGNLHFNMTELQLKQIFEAFGPVELVQLPTDPET
GHCKGFGFIQFAQLEHSKAAQSLNGKLEIAGRTIKVSSVTDHVVAQDSGAKAADFDDDDG
GGLALNAQSRAMLMAKLDRSGIASSVVPGALGVGANLVNGSGPIQAINGPSTTVPVPALA
QIVSEPVGNPSECLLLKNMFDPSTEVEPDFDLDIKDDVEDECCNYGRVKHIHVDKHSAGY
VYVRFESVEAASRAQQAMHKRWFARRLISAIFLQPYEYDAKFKSAA
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atggacttcgacgagtatgattacttggagaagacagtcgacgaggctgacaaccggaac
ggctcttcttccaaggccaaggacggcggcgccgaacagagcgagaagggttacagacgg
agggacagagaggaaggcgacgaggaagatgaccgaatcgtagaagaagatcggaagagt
aagaaaagcaaaggagaggaagagaacgggagtaggagagacagagagcgtgaccgtgag
gagaggtcttccaggtcagagcgtcacaggagtagcggtagagattcggagagagatgtg
gatagagaaagagatcggcgcagaagcagtagagatggagagagagaccgagatagagag
aggagttcgagggatagggagaaggataaagagagagatagagaaaggagttcgagggac
aaagataaggatagagagaaggagaagaaggatagagaaagggacagagagaagagggag
agagaaagggagaaggaaagagaaaggtccagaaggagccgcagtcactccaggcttgag
cgagagcgtgagaaggaattgctaagagaaaaagaaagagaactggaatcaagggaaagc
aggagattgaaagataaaaaagaagcagagcctgaagctgatccagaaagagaccaaagg
actgtttttgcttaccagatgccactgaaggcaactgaatatgatgtttatgagttcttt
tcaaaagcaggaaaggttagagatgtgagactgatcatggatagaaattcaagaagatca
aaaggagttgggtatattgagttttatgatgcaatgtctgtgccaatggcaattgccctt
tcgggtcatttgcttcttggtcaacctgtcatggtcaaaccttcagaagccgagaagaat
cttgtccaatctaatgctacagctggcgggacaggtggcattgcgggtccctacggagca
gttgaccggaaactttatgttggaaatttacacttcaacatgactgaacttcaactcaaa
cagatttttgaagcttttggacccgtggagctcgtccaactccccacggatcctgaaaca
ggtcattgtaaaggtttcggctttattcagtttgctcaacttgagcattcgaaggctgca
caaagcttaaatgggaagcttgagatagctgggaggacaattaaggtatcttcggttact
gatcatgttgttgcacaagattcaggagcaaaagctgcagactttgatgatgatgatggt
ggaggtttggctctaaatgcgcaatcaagggcaatgcttatggcaaagcttgatagaagt
ggtattgcatcaagtgttgttcctggggctcttggagtaggggcaaatctggtgaatggg
tctggcccaattcaagcgattaatgggccatctacaacagtccctgttccagctttagcc
caaattgtttcagagcctgttggaaaccctagcgagtgtttgcttttaaaaaacatgttt
gatccatccaccgaggttgagccggactttgatttggatataaaagatgatgtggaagac
gagtgttgtaattatggaagagtgaagcatatccatgttgataagcacagtgctggttat
gtgtatgtgcgatttgaaagtgtggaggcggcttcacgagctcaacaggcaatgcataaa
agatggtttgcacgcagattgatttcagcaatatttttgcaaccatacgagtatgatgca
aagttcaaaagtgcagcttga
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