Lactuca sativa (garden lettuce): 111918887
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Entry
111918887 CDS
T05352
Name
(RefSeq) autophagy-related protein 13b
KO
K08331
autophagy-related protein 13
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
111918887
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lsv04131
]
111918887
03029 Mitochondrial biogenesis [BR:
lsv03029
]
111918887
Membrane trafficking [BR:
lsv04131
]
Autophagy
Autophagosome formation proteins
ULK complex
111918887
Atg1 complex
111918887
Mitochondrial biogenesis [BR:
lsv03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
111918887
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
111918887
NCBI-ProteinID:
XP_023770273
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All DBs
Position
2:complement(151970070..151972904)
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AA seq
619 aa
AA seq
DB search
MAVNPHSEPAKMEQIITEFFAKSLHIILESRCPYVSSRNYSGEQILYSPSSSASSSSSTR
PRDKWFNLALRDCPAALENIDFWRQSNLEPMVVDVVLVQRPLNWDYTSSSPNPRVAFERN
SSSKDRFPFVWKSDSDEFGSDGSTEKIIERWVVQYESKKGCKEACSGSKRSSSTSSHALY
KKSILLLRSLYVTVRLLPAYKIFREINSSGQIRSFNLIHRVSSSVEPLIRRDEAEMQQFM
FTPVETSCGKLHISLLYLPSISDTTSESSTPMSPQFIPDYVGSPLADPLKRLPSVPMPQY
SPSSSPFGRRHSWSYDANRASPPSALPSPSPSPTYSESRTLHSKFGNHPHPHPHRPPTSS
SRYPSLEIAQVHNKDMGYDEYVPSPNFSPSTSPSPPMYLQGSNMLKVLLRSDSAPVYIPT
SRLGDAPLSSNKTVLPFSPPHKGTRPCLSLLERSSSALQGAKLLKEDHSKPSGVKISSNS
SPHKSFSRSCSRLSFEDSYDDSEFSGPFVVDDDELIDHGIGSRPGSSDRSGNLGTPHERA
VGALVQMLKKAPPLQQDLNRSHSLKQIQIQDPPPVAASNMAASSSSSRVSPVKTTSDALE
ELKVYMDMKQLLLRQSGKS
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atggcagtaaatcctcactcggaaccggcaaagatggaacagataatcacagaattcttc
gcaaagagtttgcatattatacttgaatccagatgtccctacgtctcttcacgtaattat
agtggggagcaaattttgtattctccttcttcctctgcatcgtcttcttccagtacgaga
cctagagataagtggttcaatctggctctcagggattgccctgcagcgcttgagaatatc
gatttttggcgacagagcaaccttgagccgatggtggtggatgtggttctggttcaaaga
cctctcaattgggattacacaagtagttccccaaacccaagagtagcatttgagcgaaac
tcatcatcaaaagatcgatttcctttcgtatggaaatcagattctgatgaatttggtagt
gatgggagtactgaaaagatcatcgagaggtgggttgttcagtatgagagcaagaagggt
tgtaaagaagcttgttctggtagcaagagatctagctccaccagttcacatgcattgtac
aagaaatcaattttgcttctaagatccttatatgtaactgttaggcttttacctgcttac
aagattttccgtgaaatcaactcttctggccagattcgatcatttaaccttattcatagg
gtttcttcttctgtcgagccactcatccgtagagatgaagctgaaatgcagcagttcatg
ttcactcctgtggaaacttcttgtggtaaacttcacatttctctcttatatctcccttca
atttctgacaccacttccgaatcatctaccccaatgtccccacaattcatcccagattat
gttggtagtccattagcagacccactaaagaggctaccttcagtcccaatgcctcaatac
tctccatcttcttctccatttggaaggcgccatagctggagttatgatgcaaacagggca
tcaccaccttcagcattgccatcaccatctccttcccctacatattccgaatcacgaact
ttacactctaaatttggtaatcatcctcatcctcatccccatcgcccacccactagctca
tcacgttacccttcactagaaatagctcaagttcataacaaagacatgggttatgatgag
tatgtcccttctcctaacttctcaccctctacatctccatcaccacccatgtatcttcaa
ggaagcaacatgttgaaggttctccttcgttctgatagtgctcctgtttacatacccact
tctaggcttggtgatgcacctttatcttccaataagacagttttacccttttctcctccc
cataaaggtaccagaccatgtctttctttactggagagaagctcaagtgcactccagggt
gccaagttgttgaaagaagatcattcaaagccatctggtgtgaagatttcatcaaacagc
tccccacataaatctttttctagaagctgtagcaggttatcttttgaagatagttatgat
gactctgagttttctggtccctttgtggttgatgatgatgagctgattgatcatggtatt
ggtagcagacctggttcatcagatagatcaggaaatcttggaacaccacatgaacgtgca
gttggcgctcttgttcaaatgctgaaaaaagcaccaccacttcaacaagatttgaatcga
tcacactcactgaagcagattcagattcaagatcctccgcctgttgccgcctcaaacatg
gcggcttcttcttcttcttctagggtatctccggtaaagaccacatcggatgcattagag
gagcttaaagtttacatggacatgaaacagctgctgttaaggcaatcgggtaagtcctaa
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