KEGG   Lactuca sativa (garden lettuce): 111918901
Entry
111918901         CDS       T05352                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit 4
  KO
K03012  DNA-directed RNA polymerase II subunit RPB4
Organism
lsv  Lactuca sativa (garden lettuce)
Pathway
lsv03020  RNA polymerase
lsv03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:lsv00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    111918901
  09124 Replication and repair
   03420 Nucleotide excision repair
    111918901
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:lsv03021]
    111918901
   03400 DNA repair and recombination proteins [BR:lsv03400]
    111918901
Transcription machinery [BR:lsv03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     111918901
DNA repair and recombination proteins [BR:lsv03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      111918901
SSDB
Motif
Pfam: RNA_pol_Rpb4 Glycos_transf_1 L_PA-C-like
Other DBs
NCBI-GeneID: 111918901
NCBI-ProteinID: XP_023770287
LinkDB
Position
2:151378091..151379365
AA seq 138 aa
MSGEEEENAAELKIGDEFLKAKCLMNCEVSLILEHKYEQLQQMSEDPLNQVSQVFEKSLQ
YVKRFSRYKNPDAVRQVRELLSRQQLAEFELCVLGNLCPETVEEAIAMVPSIKSRGRGHD
DEAIEKMLNDMSLIKKFE
NT seq 417 nt   +upstreamnt  +downstreamnt
atgtctggagaagaagaagagaatgctgcagagctgaaaataggcgatgagtttttgaag
gccaagtgtctaatgaactgtgaagtctccttgattcttgaacacaaatatgaacagctt
caacagatgtctgaagatccattgaatcaagtttctcaagtgtttgagaagtcactgcaa
tatgtgaagcgattcagtcgttacaagaatcctgatgctgttagacaagttcgagaattg
ctaagtagacaacagttagcagaatttgagctttgtgttcttggaaatctttgccctgaa
actgtggaggaagccattgctatggtcccatctatcaagtcgaggggacgtggacatgat
gatgaggctattgagaagatgttgaatgatatgtctttaattaaaaagtttgagtag

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