Lactuca sativa (garden lettuce): 111918907
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Entry
111918907 CDS
T05352
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 27 isoform X1
KO
K11851
ubiquitin carboxyl-terminal hydrolase 30 [EC:
3.4.19.12
]
Organism
lsv
Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lsv01002
]
111918907
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lsv04131
]
111918907
04121 Ubiquitin system [BR:
lsv04121
]
111918907
Enzymes [BR:
lsv01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
111918907
Peptidases and inhibitors [BR:
lsv01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
111918907
Membrane trafficking [BR:
lsv04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
111918907
Ubiquitin system [BR:
lsv04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
111918907
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
FISNA
Motif
Other DBs
NCBI-GeneID:
111918907
NCBI-ProteinID:
XP_023770297
LinkDB
All DBs
Position
2:151133674..151136468
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AA seq
569 aa
AA seq
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MKIHGDVNVQSLFHSFRHGFRSLSHNAHWVTSSGFQISIASSILSVAGLILAFRDERGRR
GFNNLFLSWSSSSESESSPEKSWVVPGLQNLGNNCFLNVVLQALASCSSFLSSLQKIVED
FEASSEIEVNEDMPLAVSLNALLQELRIIRHKGKVLSPRKVMLAMALYTPNFNLTSQQDA
EEALAHMLSSLREECSVCFGSNHNSLTIATASSNRILSPNGRIIHSDLERWTQSFLGPFN
GIIGSILTCQSCSFQISLDFQFFNCLYLSPPTYGGGSIMPGCSIEDCMKQFFVAERLENY
FCTHCWHTSATKYLSLLNKNETDIEKLQNCSKQDTCGCRNIQSLKSLPWSNNYSHTFKQL
HIARSPKILCLNLQRASINAFGESVKLQGHISFPLSLNMSRFQNRGVEIKHMEQNQQPIR
YSHIFKLQNDSHPLCNVYKQGKESNLTEKYTDFVETKQPCSEVDSELEIQEEQSHETLKS
TPNGDHTYNLVSVVEHFGSTGGGHYTVYRRVSKKKTNDDNNNNTEIDVISEPCDVYWVGV
SDSHVCRVSEEDVLGSRASLLFYERVLES
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatccacggcgacgtgaatgttcagtcgctgtttcattcattcagacatgggttt
agaagcctctctcacaacgcccactgggttacttcatctggattccaaatttctattgca
agtagcatactcagtgttgctggtttgattcttgcttttagagatgaaagaggaaggagg
ggtttcaacaatttattcttatcatggtcgtcatcgtcggagagcgaatcttcgcctgag
aaatcgtgggtcgttcccggattgcaaaatctcggcaacaattgcttcttgaacgtagtt
ctgcaggctttggccagctgttcttcctttctgagttccctccagaagattgtggaggat
ttcgaagcttcatcagagatcgaagtaaacgaggacatgccacttgcagtctcgttgaat
gctctattgcaagaattacgcatcattcgacataaaggaaaagtattaagtccacgaaaa
gtgatgcttgcaatggctctttatacccctaacttcaacctaacaagtcaacaggatgca
gaagaagcattagcccacatgttatcttctttaagagaagaatgttcagtatgttttggc
tcaaatcataattctctaactattgcaactgcatccagtaatcgtattctttccccaaat
ggaaggattatccacagtgatctagaaagatggactcagagttttcttggaccctttaat
ggaatcattggcagcattttgacttgtcaaagctgttcgtttcagatttcactcgacttc
caattcttcaattgtttatacctttcaccaccaacatatggtggtggttctatcatgcct
ggatgctctatagaagattgcatgaagcaattttttgttgcagaaaggcttgaaaattat
ttttgcactcattgctggcatacttctgccacgaaatatttatctctgctaaataaaaac
gagacagatattgaaaaactccaaaattgtagcaaacaagatacatgtggctgcagaaat
atacaatctcttaaatcattaccttggtcaaataactattcacatacattcaagcaatta
catattgcacgtagtccaaagattttatgcctcaatttacaacgtgcttcaattaatgca
tttggggaatccgttaagctccagggtcatatctcttttcctttgagtttgaacatgtca
cgattccaaaacagaggagttgaaataaaacatatggagcaaaatcaacagccgattcgt
tattctcacattttcaaattacagaatgatagtcaccctttgtgcaatgtatacaaacaa
ggaaaagaaagcaatttaacagaaaaatatactgattttgtggaaactaaacaaccttgt
tcagaagttgatagtgaattagaaatccaagaggaacaaagtcatgagactttgaagtca
acaccaaatggagatcatacatacaatcttgtttctgttgtggagcattttggaagcaca
ggaggtgggcattatacggtttacagaagagtaagtaaaaagaaaacaaatgatgataat
aataataatacagaaattgatgtgatttcagagccttgtgatgtgtattgggttggggtg
tcagatagccatgtttgtagggtatctgaagaagatgttcttggctcaagggctagcttg
cttttctatgaaagagttttagaaagttga
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