Lactuca sativa (garden lettuce): 111918953
Help
Entry
111918953 CDS
T05352
Name
(RefSeq) coatomer subunit beta'-2
KO
K17302
coatomer subunit beta'
Organism
lsv
Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lsv04131
]
111918953
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lsv04147
]
111918953
Membrane trafficking [BR:
lsv04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
111918953
Exosome [BR:
lsv04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
111918953
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B-prop_COPA_B_2nd
TPR_COPA_B
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_EML
Beta-prop_EIPR1
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
Beta-prop_RIG_2nd
Beta-prop_SCAP
Beta-prop_IFT140_1st
ANAPC4_WD40
PEP5_VPS11_N
Beta-prop_DCAF4
NBCH_WD40
Beta-prop_HPS5
Beta-prop_SPT8
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
Beta-prop_Nup120_160
Beta-prop_WDR35_TULP_N
WD40_RFWD3
WD40_like
WD_LRWD1
TPR_GEMI5
FAT
PH_SPO71
Motif
Other DBs
NCBI-GeneID:
111918953
NCBI-ProteinID:
XP_023770337
LinkDB
All DBs
Position
4:187393659..187401071
Genome browser
AA seq
911 aa
AA seq
DB search
MPLRLEIKRKLAQRSERVKSVDLHPTEPWILASLYSGTVCIWNYQTQIMVKSFEVTELPV
RSAKFIARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDD
MLIKLWDWEKSWFCTQIFEGHSHYVMQVTINPKDTNTFASASLDRTIKIWNLGSPDPNFT
LDAHLKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKTCVQTLEGHTHNVSAVCFHPE
LPIIMTGSEDGTVRIWHSTTYRLENTLNYGLERVWAVGYMKGSRRIVIGYDEGTIMVKIG
REEPVASMDNSGKIIWAKHNEIQTVNIKSVGADHEVSDGERLPLAVKELGTCDLYPQSLK
HNPNGRFVVVCGDGEYIIYTALAWRNRSFGSALEIVWSSDGEYAVRESTSKIKIFNKSFQ
EKKSIRPTFSAEKIFGGSLLAMCSNDFICFYDWAECRLIQRIDVNVKNLYWADSGDLVTI
ASDSMFHILKYNRDVVSAHFDSGRSVDEQGVEDSFEPLYDINERVRTGLWVGDCFIYNNS
SWRLNYCVGGEVTTMFHLDRPMYLLGYLANQSRVYLIDKEFNVIGYTLLLTLIEYKTLVM
RGDLERASDLLPSIPQDHHNSVARFLESRGMIEEALEVATEPDYRFELAIQLGKLDIAKD
IALVAQSESKWKQLGELAMSTGMLDMAEDCLKHANDLSGLLLLYSSLGDAEEIIKLASLA
KENGKNNVAFACLFMLGKLEDCLQLLIDSNRIPEAALMARSYLPSKVSEVVALWRKDLNK
VNQKAAESLADPDEYPNMFEDWQVALQVESRSADTRGSYPPATEYVNYVDRSHVNLVDAF
KHMQLDVHENGELDQEDVEEENEKEEEFVGNKDKDKDNDSLDGGVLVNGHEAEAEVDEEW
VTDNAGNPSAA
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atgcctctgagactcgagatcaagaggaaactcgctcaaagatcagaaagagtaaaatcc
gtggatctgcacccaacggagccatggatcctagcaagtttgtattcggggacagtctgc
atctggaattaccagacccagattatggtaaaatcatttgaggtgaccgaattaccagtc
agatcagcaaagttcatagcacgcaagcaatgggttgttgctggtgcagatgatatgttt
attcgtgtatacaattataatacaatggacaaagtcaaagtctttgaggcacatactgat
tacatccggtgtgtggctgtgcaccctacactaccatatgtattatcatcatctgatgac
atgcttataaagctttgggattgggagaaaagttggttttgtactcaaatctttgagggt
cattctcattatgttatgcaagtcaccattaaccctaaagacaccaatacttttgcaagt
gcatcacttgatcgcactataaagatttggaatcttggttcacctgatcctaacttcaca
ctggatgcacatctcaaaggagtgaactgtgtggattactttactggtggtgataaaccc
tatcttattactggatcagatgatcacactgctaaggtatgggattatcaaactaaaact
tgtgtccaaactctagaaggtcacacacacaatgtttctgctgtatgtttccatcccgag
cttccaataataatgacaggttcagaagatggtactgttcgtatatggcattcaaccact
tacagacttgagaacaccttgaactatggacttgaaagggtttgggctgttggatacatg
aaaggttcacgtcggattgttattggctatgatgagggaaccataatggtgaaaattgga
cgtgaagagcctgtagccagcatggacaatagtgggaaaattatatgggctaaacataat
gaaattcaaactgttaacatcaagagtgtgggagctgatcacgaggtttctgatggagag
aggctgcctttagcagttaaagaactgggtacatgtgatctttatccacaaagcttgaag
cacaacccaaatgggagatttgttgttgtctgtggtgatggtgaatacatcatatataca
gctttggcatggagaaatagatcatttggatctgcattagagattgtttggtcatctgat
ggtgaatatgctgttagggaaagtacatctaagatcaagatcttcaacaaatcttttcag
gaaaagaaaagcatccggccaaccttttcagctgagaaaatattcggaggatctttactt
gcaatgtgttcaaatgattttatatgtttctatgattgggctgagtgtagattgattcaa
cgaattgatgtcaatgtcaaaaatctttactgggcagatagtggtgatcttgtcacaatt
gccagtgattcaatgtttcacatactaaagtacaatcgcgatgtagtgtctgcacatttt
gatagtggaagatctgtagatgaacaaggtgttgaggattcctttgaacctctgtatgat
ataaatgaaagagttagaactggattatgggttggggactgttttatttacaataattct
tcatggagactcaattattgtgtgggtggtgaggtaaccacaatgtttcatttggatcga
ccaatgtatcttttaggatatttagccaaccaaagcagggtttatctcattgacaaagaa
tttaatgtcattggatacacattgcttctcaccttgatcgagtataaaacacttgtgatg
cgtggagaccttgaacgagctagtgaccttttgccatcgattccgcaggaccatcataac
agtgttgctcgttttctggaatcacgaggcatgattgaagaggctttggaagttgctaca
gagcctgattatagatttgagcttgccattcagcttggtaaactagacattgcaaaggat
attgcgttagtagcccagagtgagtcaaaatggaagcaattgggagaactagctatgtct
actggaatgttggacatggctgaagattgtttgaagcatgcaaatgatttaagtggttta
ttactactctattcttctttaggagatgctgaagagattataaaacttgcatcacttgca
aaagaaaacggaaaaaacaatgttgcattcgcttgtctatttatgttgggtaaattagaa
gactgcctacagttgttaattgacagcaacaggatacccgaagctgctttaatggcacga
tcttaccttccaagcaaagtttcagaagtagtcgccctttggagaaaagaccttaacaag
gttaaccagaaggctgcagaatccttagcggatccagacgagtacccaaatatgtttgag
gactggcaagttgcactacaagttgaatcaagaagcgcagacacaaggggtagttatcct
ccagcaacagaatatgtgaattatgttgatagatcgcatgtgaacctagttgatgctttc
aaacacatgcaactggatgttcatgaaaatggagagttggatcaagaggatgtagaagaa
gagaatgaaaaggaggaggaatttgttggtaataaggataaggataaggataatgattct
ttagatggtggtgtacttgttaatggtcatgaggctgaggctgaggttgatgaagagtgg
gttacagataatgcaggaaatccatcagcagcctaa
DBGET
integrated database retrieval system
