Lactuca sativa (garden lettuce): 111919015
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Entry
111919015 CDS
T05352
Name
(RefSeq) vacuolar protein sorting-associated protein 53 A
KO
K20299
vacuolar protein sorting-associated protein 53
Organism
lsv
Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lsv04131
]
111919015
Membrane trafficking [BR:
lsv04131
]
Protein recycling
Others
EARP complex
111919015
Endosome - Golgi transport
Tethering complex
GARP complex
111919015
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps53_N
VPS53_C
COG4_N
Vps54_N
DUF401
XhlA
COG5_N
Motif
Other DBs
NCBI-GeneID:
111919015
NCBI-ProteinID:
XP_052625554
LinkDB
All DBs
Position
3:complement(300570215..300588191)
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AA seq
825 aa
AA seq
DB search
MEKAGSGTVEYINKMFPTEASLSGVEPLMKKIHNEIRVVDAEILGAVRQQSTSGTKAKED
LAAATSAVNELMFKVREIKTKAEQSETMVQEICRDIKKLDFAKKHITTTITALHRLTMLV
SAIEQLQVMASKRQYKEAAAQVEAVNQLCSHFDAYRDIPKITELRDKFKNIKQILKSHVF
SDFSSLGTGKDAEESNLLQQLSDACLVVDALEPSVREELVKNFCNRELISYKQIFEGAEL
AKLDKTERRYAWIKRRLRTNEEIWKTFPASWHVDYLICIQFCKLTRTQLIEIFQNLKEKP
DVGTLLLALQRTIEFEEELAEKFGSSSTKSVMSDIEEVDKGENSTQIVMDIRKKYERKLA
AHQGNQGDDKDANKDLAVPGAGFNFRGIISSCFEPHLMVYVELEERTLMEHLEKLVQDET
WHMDDGSQTNILSSSMQVFLIIRRSLKRCCALTRNQTLLNLFKVFKRVLRAYATKLFMKL
PKGGLGIVAAATGMDGHIKTSNKDERLICYIVNTAEYCHKTAGELAENVSKIIDSQLADS
VDMSEVQDEFSSVITKALVTLVHGVETKFEVEMAAMTRVPWGMLESVGDQSGYVNSINMI
LSGCVPVLGSLLSPVYFQFFLDKLASSLGPRFYLNIFKCKQISETGAQQMLLDTQAVKTI
LLDIPSLGRQAIGAAGYSKFVSREMSKAEALLKVILSPIDSVADTYGALLPEGTPSEFQR
ILELKGLKKADQQTILDDFNKRGSGISESPMGTQAVQVAHAVATPVPPPMAGPPSAAGIS
SREDVLTRAAALGRGAATTGFKRFLALTEAAKDRKDGPFRKLFNP
NT seq
2478 nt
NT seq
+upstream
nt +downstream
nt
atggagaaggctggtagtggtactgtggagtacattaacaagatgtttcctacggaagca
tctttatcgggagttgagccactgatgaagaaaatacacaatgaaatccgtgttgtggat
gctgaaattctaggagctgttcgtcaacagagtacatcaggaaccaaagcaaaggaggat
cttgctgcagctacaagtgctgtgaacgaactcatgtttaaagtaagagaaatcaaaacc
aaagctgagcaaagtgaaacaatggttcaagaaatatgtcgtgacattaaaaaactggat
tttgcaaaaaagcacataacaaccacaatcacagccctccatcgtcttactatgctagtt
tctgcaatcgagcaacttcaagtaatggcttcaaaacgacaatataaagaggctgctgca
caggtagaggctgtcaatcagttatgtagtcattttgatgcctacagagatattcccaag
atcactgagctaagagacaagttcaagaacatcaaacaaattctcaagtctcacgtgttc
tctgatttctccagcttaggtacaggaaaagatgctgaggaaagtaatttgctgcaacaa
ttatcagatgcctgtttggttgttgatgcattggagccatcagtgagggaagagttggtg
aagaacttttgcaatcgggagcttatttcttacaaacagatatttgaaggagctgagctg
gcaaagttagataaaacagagaggagatatgcttggatcaaacgccgattacggacaaat
gaagaaatatggaaaacatttcctgcttcatggcatgtggattacttgatttgtattcag
ttctgcaaattgacaaggacacaacttattgagatctttcaaaatttgaaagagaagcca
gacgttggaacactacttctggcattgcaacggacaatagagtttgaggaagagttagca
gagaaatttggtagcagtagtaccaaaagtgttatgagcgacattgaggaagtagataaa
ggggaaaatagtactcaaattgtgatggatattcgaaagaaatatgagagaaaacttgct
gcacatcaaggaaaccagggtgatgataaagatgcaaataaagatttagcagtacctgga
gctgggtttaattttcgtggaattatatcatcctgctttgaaccacacttgatggtatat
gtagaattagaagagagaacccttatggagcatctggagaagcttgttcaggatgaaaca
tggcatatggatgatggaagtcagactaatattttatccagtagcatgcaggtctttttg
attatcagaaggagtttgaaacgctgttgtgccttgacaagaaaccagacactcctaaat
ttgttcaaggtcttcaagagagttcttagagcctatgctacaaagcttttcatgaagcta
cctaaaggtggtctggggattgttgcagctgccacaggtatggatggacacatcaagaca
tctaataaagacgaaaggctgatatgctatatagtcaacactgctgaatattgtcataaa
acggcgggtgagttggctgaaaatgtctcaaaaataatagattcccaattggctgattca
gtggatatgtcagaagtccaggatgaattctcatcagtcataacaaaagcattagtaaca
ttagtgcatggcgtagagactaaatttgaggttgaaatggctgcaatgacacgtgttcct
tggggtatgcttgaaagtgtgggtgaccaatcagggtatgtcaatagcataaatatgatt
cttagtggttgtgttcctgtacttggaagccttctttctccagtttactttcagttcttc
ttggataagctggcttcatctctaggtccacgtttctacctcaatatcttcaaatgcaag
cagatatcagaaaccggagctcaacaaatgttattggatactcaagccgtaaagacaatt
cttttagatattccatcccttggaagacaggcaataggagctgctggctattcaaaattt
gtaagccgtgaaatgagcaaagcagaagcactcctgaaggtgatactgtcccctattgat
tctgtagcagatacatatggagcacttctacctgagggaacaccttcagagtttcagaga
attctagagctcaaggggctaaaaaaggccgaccaacaaacaatactggacgatttcaac
aaacgtgggtccgggatttcggaatcgccaatgggcacacaagcagtccaggtggcacat
gcggtggcaactcctgtgccaccacccatggcgggtccaccttcagctgcaggtatctca
tcaagagaagatgtgcttactagagcagcggcacttggaagaggtgccgccacaactgga
ttcaaaaggttcttggctttgactgaagcagcaaaagaccgcaaagatggacccttccgt
aaacttttcaatccctga
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