KEGG   Lactuca sativa (garden lettuce): 111919072
Entry
111919072         CDS       T05352                                 
Name
(RefSeq) uncharacterized protein LOC111919072
  KO
K24739  WD repeat-containing protein 13
Organism
lsv  Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:lsv00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:lsv04990]
    111919072
Domain-containing proteins not elsewhere classified [BR:lsv04990]
 Other domain-containing proteins
  WD40 repeat (WDR) domain-containing proteins
   111919072
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_THOC3 Beta-prop_WDR3_1st WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz WD40_Prp19 WD40 WDR55 Beta-prop_WDR36-Utp21_2nd Beta-prop_CAF1B_HIR1 Beta-prop_IFT140_1st Beta-prop_WDR3_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_RIG_2nd EIF3I Beta-prop_WDR36-Utp21_1st Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd ANAPC4_WD40 Beta-prop_HPS5 Beta-prop_WDR35_TULP_N WD40_Gbeta Beta-prop_Aladin WDR90_beta-prop_4th Beta-prop_EML Beta-prop_WDR19_1st KNTC1_N NBCH_WD40 Beta-prop_WDR75_1st Beta-prop_SCAP Beta-prop_NUP159_NUP214 CPSF_A Beta-prop_TEP1_C Beta-prop_VPS8 Beta-prop_Vps41 Beta-prop_IFT122_1st Beta-prop_EMC1_N WD40_like Beta-prop_SPT8 Beta-prop_RIG_1st WD40_RFWD3 Hepar_II_III_C
Other DBs
NCBI-GeneID: 111919072
NCBI-ProteinID: XP_023770447
LinkDB
Position
7:complement(166337790..166341563)
AA seq 498 aa
MADQTIEKRSSEVDDHEREPSKKKDVTEDPETFSCMLQPCPADSDPKYVGIRRLLLFRKA
QSGVLRRKDWRCNAKGYVAYRNFINRPDNWLNSQIPSRTSTPGTSGRWVPSPTPSQLSMA
LEVENWSTGSWTGMKDLRDSQTPSHNTVSSFGVSSTEFEHPRRKTEHAYSFVGMHCIFDE
CKSMVTVIKFGHMSSDVLAYGATDGTLTVCSVSDPPSIMNKLTGHSKDVTDFDFSLNNQY
IASSSLDKTVRVWDIPNGLCIRVIYGVTSQLCIRFHPVNNNFLSVGNAQKEVSIFNFSTG
RVISKTVVDSEVTTLDYDHTGQFIFCGDAQGCIYTVKVNSHQGTLSRSHRTKTSSKEKSE
FTTIQYRTFSLMTQGPVLLALTRDGNLSFFSVSLELQGYLTLQCSLKLAPRLHSIRASFC
PLLSLEKGEYIVIGSEDAAVYFYDLTRPKNTCVNKLQGHGYPVIAVAWNHGENLLASSDF
GGTVIVWKREKSKQKEVT
NT seq 1497 nt   +upstreamnt  +downstreamnt
atggcggatcagacgatcgagaaacgttcgtctgaagttgatgatcatgagagagaaccg
agtaaaaagaaggacgttaccgaggatccagaaaccttcagctgtatgcttcagccctgt
cctgccgactccgatcctaaatacgtcggaattcgccgccttcttctctttcggaaagct
cagtcaggcgttcttcgccgaaaggactggagatgcaatgctaaaggctatgtagcttat
cgcaatttcatcaacaggccagataattggttaaattcgcaaataccaagtcgcactagc
acccctggaaccagtggtcgatgggtaccatctccaactccaagtcaactatctatggct
cttgaggtggaaaactggtccactggtagctggactggtatgaaggatctacgtgatagt
caaacaccgagtcataatactgttagtagttttggtgtaagttcaactgaatttgaacac
cctcgtcgaaaaactgaacatgcatattcgtttgtgggaatgcattgcatctttgatgaa
tgcaaatcaatggttactgttataaagtttgggcatatgagttctgatgttcttgcttat
ggagcaacagatggaacattaacagtttgcagtgtctctgatccaccttcaatcatgaac
aaattgactgggcactcaaaagatgtcacagattttgacttttcattgaacaaccagtac
attgcatcatcttcattggataaaactgtcagggtttgggatataccaaatggcctttgc
attcgagtaatatatggagttacttctcagctttgtattcgttttcatcctgtgaataat
aacttcctttcagttggcaatgcacaaaaagaagtctcgatattcaattttagcacggga
agagtaataagtaaaacagttgtggacagtgaggttacgactcttgattatgaccatacg
ggtcagtttattttttgtggggatgcacagggatgtatatacacagttaaagtaaactct
catcaaggtactttatcacgctcacatcgcactaaaactagcagcaaggaaaagtcagaa
ttcactactatacaatacagaacattttctttaatgacacaaggtcctgtgttattggct
cttacacgagatggaaatttgtctttcttcagtgtttctttggagttacaaggctatttg
actctacagtgctccctcaagttggccccacgtcttcatagcattcgtgcttctttttgt
ccattactttcccttgaaaaaggggaatatatagtgattggaagtgaggatgcagctgtg
tatttctatgacttaactcggccgaagaatacatgtgtgaacaaactccagggacatgga
tacccggtgattgcagttgcatggaatcatggtgagaatcttttggcttcctctgatttt
ggtggcactgtaattgtttggaagagagaaaaatcaaagcaaaaagaggtcacctaa

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