Lactuca sativa (garden lettuce): 111919088
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Entry
111919088 CDS
T05352
Name
(RefSeq) aconitate hydratase, cytoplasmic isoform X1
KO
K01681
aconitate hydratase [EC:
4.2.1.3
]
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv00020
Citrate cycle (TCA cycle)
lsv00630
Glyoxylate and dicarboxylate metabolism
lsv01100
Metabolic pathways
lsv01110
Biosynthesis of secondary metabolites
lsv01200
Carbon metabolism
lsv01210
2-Oxocarboxylic acid metabolism
lsv01230
Biosynthesis of amino acids
Module
lsv_M00009
Citrate cycle (TCA cycle, Krebs cycle)
lsv_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
lsv_M00012
Glyoxylate cycle
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
111919088
00630 Glyoxylate and dicarboxylate metabolism
111919088
Enzymes [BR:
lsv01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.3 aconitate hydratase
111919088
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Gene cluster
GFIT
Motif
Pfam:
Aconitase
Aconitase_C
HypD
Motif
Other DBs
NCBI-GeneID:
111919088
NCBI-ProteinID:
XP_052621291
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Position
7:complement(166978388..166985566)
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AA seq
992 aa
AA seq
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MHITGPHSSTLLRRASRSSATRLHSSLSGKSSSPSPSPVASQSRSHTTASAAFRSVRSRW
SHGVDWKSPASLSSQIRTTASPVLDRFHRSLATMASDHAFSGILTGLPKPGGGEFGKFYS
LPALNDPRVDKLPYSIRILLESAIRNCDNFQVTKADVEKIIDWEKTSPNQVEIPFKPARV
LLQDFTGVPAVVDLAVMRDAMNNLGGNSEKINPLVPVDLVVDHSVQVDVARSENAVQANM
ELEFKRNKERFAFLKWGSKAFQNMLVVPPGSGIVHQVNLEYLGRVVFNTDGMLYPDSVVG
TDSHTTMIDGLGVAGWGVGGIEAEATMLGQPMSMVLPGVVGFKLSGKLRNGVTATDLVLT
VTQMLRKHGVVGKFVEFHGDGVGKISLADRATIANMSPEYGATMGFFPVDHVTLQYLKLT
GRSDDTVAMIEAYLRANNMFVDYNEPQQERVYSSYLSLDLSEVEPCISGPKRPHDRVPLK
DMKADWHSCLDNKVGFKGFAVPKETQDKVAKFSFHGQEAELRHGSVVIAAITSCTNTSNP
SVMLGAGLVAKKACELGLKVKPWVKTSLAPGSGVVTKYLLQSGLQKYLNEQGFNIVGYGC
TTCIGNSGELDESVGAAITENDIIASAVLSGNRNFEGRVHALTRANYLASPPLVVAYALA
GTVDIDFETEPIGVGKDGKDVYFRDIWPSTEEIADAVQSSVLPEMFKSTYKSITDGNPMW
NDLSVPQAKLYSWDPNSTYIHEPPYFKNMTMDPPGAHGVKDAYCLLNFGDSITTDHISPA
GSIHKDSPAAKFLLEHGVDRKDFNSYGSRRGNDEIMARGTFANIRIVNKLLNGEVGPKTV
HIPSGEKLSVFDAASKYKEAGQDTIVLAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFER
IHRSNLVGMGIIPLCFKAGEDADTLGLTGHERYTIDLSSNINEIRPGQDVTVSTDTGKSF
TCVARFDTEVELAYFNHGGILPYVIRQLAAQK
NT seq
2979 nt
NT seq
+upstream
nt +downstream
nt
atgcatataacaggacctcactcttcaactctccttcgtcgagcttctaggtcctcagcc
accaggcttcactcttctctttccggaaaatcttcttcgccgtcgccttcaccagtcgcg
tctcagtcccgatctcataccaccgcatcggctgctttccgctccgtccgatctagatgg
agccacggtgttgattggaagtctcctgcctcgctgtcttctcagatcaggactactgct
tctcctgttcttgaccgttttcaccgtagtctcgctaccatggcctctgatcatgctttc
agtgggattttgactggtctcccaaagcctggaggtggagagtttggaaagttctatagt
ttgcctgcgctgaatgatccaagagttgacaagctgccatattcaattaggatacttctc
gaatcagccatccgtaattgtgacaatttccaagtcaccaaggcagatgtcgagaaaatc
attgattgggagaagacttctccaaatcaagttgagatcccattcaagccagctcgtgtt
ctcttgcaggattttactggtgtgcctgctgtggtagatcttgctgttatgcgtgatgcc
atgaacaatcttggtgggaactctgaaaaaatcaatcctttggttcctgtggatcttgtt
gttgatcattcagttcaagttgatgttgctaggtctgaaaatgcagtacaagcaaatatg
gaacttgagttcaagagaaacaaagaaagatttgcttttcttaagtggggatccaaagct
ttccaaaacatgcttgttgttccacctggatccggtattgtgcatcaggtcaatcttgaa
tatcttggaagggttgttttcaacactgatgggatgttgtaccctgatagtgttgtggga
actgattcccacacaactatgattgatgggttaggtgttgctggttggggagttggagga
attgaagcagaggccacaatgcttgggcagccaatgagcatggttttgcctggtgttgtg
gggttcaagttatcagggaaactccgcaatggtgtaacagctactgatttggttttaact
gtcacccaaatgttaagaaagcatggtgtcgtaggcaaatttgttgaatttcatggggat
ggtgttggtaaaatatcacttgctgacagggcaaccattgccaacatgtcaccagagtac
ggtgctaccatggggttcttcccagtggatcatgtcactcttcagtatctcaagttaact
ggaagaagcgatgatacagtggctatgatagaagcttacttacgtgcaaacaatatgttt
gtcgattataatgagccacaacaagaaagagtctactcatcttacttgtcactagacctt
tcagaagttgaaccctgtatttcagggcccaaaagacctcatgaccgagtccctttgaaa
gacatgaaagcagattggcattcttgccttgataataaagtcggattcaagggttttgct
gtaccaaaagagacacaagacaaagttgcaaagttttcatttcatggacaggaagcagaa
cttagacatgggagtgttgtgattgctgcaattacaagttgcacaaatacatcaaaccct
agtgtcatgcttggggcaggtcttgttgccaaaaaggcctgtgaattaggcctaaaggtc
aagccatgggtcaagacaagtctagctccaggttctggagttgttaccaaatatttgctc
caaagtgggctgcagaagtatctaaatgaacaagggttcaacattgttggatatgggtgc
acgacatgtattggcaattcaggggaattggatgaatcagttggtgcagctattactgaa
aatgatatcattgcatcagctgttctttctgggaatagaaactttgagggacgtgttcat
gccttgacaagagcaaactatcttgcatcgcctcctttggttgttgcctatgcccttgct
ggcacggttgatatcgattttgagactgaaccaattggtgttggaaaagatggaaaggat
gtttatttcagagatatctggccaagcactgaagaaattgcagatgctgttcaatcgagt
gttcttccagaaatgttcaagagtacttacaaatccatcaccgatggaaaccccatgtgg
aatgacctttcagtccctcaagccaaactttactcatgggatccaaactccacctacatt
catgaacccccgtatttcaaaaacatgacaatggacccccctggtgcccatggtgtcaag
gacgcctactgcctcctcaatttcggtgacagtatcacaaccgatcacatttcgccagct
ggaagcatccacaaggacagcccggctgcaaagtttcttctagaacatggtgtcgatcgt
aaggattttaattcttatggtagtcgacgtggtaatgatgagattatggccaggggtact
tttgccaatattcgtattgtcaataagcttctgaatggagaagtgggcccgaaaacggtt
catattccttccggagagaaattatccgtctttgatgctgcatccaaatacaaggaggct
ggtcaagatacaattgtgttggctggagcagagtatggaagtggaagttccagagattgg
gctgccaagggccctatgttattgggggttaaagcggtaattgcaaaaagcttcgagagg
attcatcgtagtaatttggtaggaatgggtattataccactttgcttcaaagccggtgag
gacgcagacacactagggttgactggtcatgaaagatacaccattgacttatcaagcaac
attaatgaaatccgccccggtcaagatgtcacagtcagtactgataccggaaagtcattc
acgtgtgtcgcccgctttgacactgaggtggaattggcgtatttcaaccatggtggaatt
cttccatatgttatccgacaactagcggcacaaaaatga
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