KEGG   Lactuca sativa (garden lettuce): 111919142
Entry
111919142         CDS       T05352                                 
Name
(RefSeq) DNA repair protein RAD5B isoform X1
  KO
K15505  DNA repair protein RAD5 [EC:5.6.2.-]
Organism
lsv  Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:lsv00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lsv03400]
    111919142
DNA repair and recombination proteins [BR:lsv03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    111919142
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C HIRAN zf-C3HC4 zf-C3HC4_3 ResIII zf-RING_UBOX DEAD zf-RING_2 zf-C3HC4_2 Prok-RING_4 RING_XB3-XBAT31 zf-C3HC4_4 zf-RING_5 zf-ANAPC11 zf-RING_4
Other DBs
NCBI-GeneID: 111919142
NCBI-ProteinID: XP_023770523
LinkDB
Position
3:264926440..264933728
AA seq 1117 aa
MEKSPIDIEDDAKSSKPIVSIDLTLSPPSKPIKTEDAMAIDTPGFPVKRTITSTGGTRIT
TTPMIKEEEQEGKDCYIGDDGCSKAKKPRMSFSEFLDATNTKVLSENDPRYLAFVKKERM
DESEPVLDVEPISVSNKAGFNQNSQNVSVKSEQVDESETKPQVKPIPVKKELDGFQVGKQ
EQKPKLVQPISSMPQSLYSLHLKREREGVTDDKKLNPILIENGDFEEEPDWLLVGRTAIT
GVSTTKGRKLEDNEIVHFAFPNIDSRSKSSYWTNSRAAIAASGIVRFSTKRSGEIGRLPM
EWSKCLIPLVNSKKVKVLGRCVAAPVCLSMMQEIMLYISFYIHHSIFSEDGKSSWKLESS
SNIDSTLYPLLTLFKLLKKNPFQKAEFTPEELDSRKKATLEADINEAASSLPVVKRQKGG
EPLLLEPNKDAQILSESSLNKLVGAADMYNLEEMDPPTTLRCDLRPYQKQALYWMTESEK
GVDVEKAEETLHPCWAAYNICDERATAIYVNIFSGEATTKFPKATQTAIGGILADAMGLG
KTVMTISLILSRTGKETLEIQEKKDSIKSRNNNESFSKRPKGGTLIVCPMALLSQWKDEL
ETHSTPNSLSVFVHYGGERSNDPKVIAEPTVVLTTYGVLSASYKTYSENSIFHKVDWYRV
VLDEAHTIKSSKSQCAQAAFALSAYCRWCLTGTPLQNNLEDLYSLLCFLRVEPWCNWAWW
NKLIQKPYENDDKRGLKLVKAILRPLMLRRTKDTKDKEGRPILVLPPTDIQVIECEQSEA
ERDFYDALFKRSKVQFDQFVAQGKVLHNYANILELLLRLRQCCNHPFLVMSRGDTQQFSD
LNKLAKRFLDINSDSSAPNPSKAYIEEVVTDLKKGENTECPICLESADDPVLTPCAHRMC
RECLLSSWRSPIQGLCPICRQNLRKTDLITCPTESKFRVDVEKNWKESSKVLKLLECLES
IRGKGFGEKSIVFSQWTSFLDLLEIPLKRRKIGFLRFDGSLSQKNREKTLKEFNETSDKM
VLLMSLKAGGVGLNLTAASNVFLMDPWWNPAVEEQAIMRIHRIGQKRTVCVRRFIVKETV
EERMQQVQARKQRMIAGALTDEEVRSARLEELKMLFR
NT seq 3354 nt   +upstreamnt  +downstreamnt
atggagaaatcacccattgatatagaagacgatgcaaagagcagcaaacccatcgtttca
attgatctcactctttcacccccttcaaaacccataaaaaccgaagacgccatggccatc
gatacgccgggatttcctgtcaaacggacgattacaagcacaggcgggactcgaatcacg
acaactccgatgatcaaagaggaagaacaagaaggtaaggattgttacattggcgatgat
ggctgtagtaaggcaaaaaaacctagaatgtctttttctgagtttctcgatgcaaccaat
actaaggttttatcggaaaacgatccccggtatcttgcttttgttaagaaagaaagaatg
gatgaatctgaaccggtccttgatgtggaacctatttctgtttccaacaaagctggtttt
aatcagaactcccaaaacgtatctgttaaatcagaacaagttgatgaatctgaaaccaaa
cctcaagtaaaaccgatccctgtaaagaaagagttggatggatttcaagtgggcaaacaa
gaacaaaaaccaaagttggttcaaccgatttcatcgatgcctcaatctctatacagttta
catttgaagagggagagggaaggagttacggatgataagaagctgaatccaatactaata
gaaaacggggatttcgaagaagaacctgattggttgctggtcggaagaaccgccattact
ggtgtatcgactacaaaagggaggaaactcgaagacaacgaaatcgtccactttgctttt
cctaatatcgattcaagaagtaagagtagctactggaccaattcacgagctgcaattgct
gcttctgggatagtaagattctctacaaaacgatccggagagattgggcgtcttccaatg
gagtggtcaaagtgcttaattccacttgttaattcaaaaaaggtgaaagttcttggcaga
tgtgtagctgcacctgtgtgtctctcaatgatgcaagagatcatgctttatattagtttt
tatattcatcattcaatctttagtgaagatggaaagtcttcatggaagctggaatcctct
tcaaacatcgactcaacactttatcctctcttgactttgtttaagttgttgaaaaagaat
ccatttcaaaaggctgaattcacaccagaggagcttgattctcgtaaaaaagcaacactt
gaagctgatataaatgaagctgcatcatcacttcctgttgtaaaaagacaaaaaggtgga
gaaccattgcttttagaacccaataaagatgctcaaattctttctgaatcatctttaaac
aagcttgttggagctgctgacatgtacaatttggaggaaatggatcctccaactaccctt
agatgtgatttaaggccataccagaagcaagctctttattggatgacagaatcagagaaa
ggtgttgatgttgagaaagcagaagagacacttcatccatgttgggctgcatataatata
tgtgatgaaagggccactgcaatttatgtgaatattttctctggggaagcaactactaaa
ttcccaaaagcaacacaaacagccattggagggatattagcagatgcaatgggacttggt
aaaactgtgatgacaatttctttaatcctttcaagaacaggaaaagaaaccctagaaatt
caagaaaaaaaagattccataaaaagtagaaataataatgaaagcttctcaaaaagacca
aaaggtggaacactcattgtttgtcctatggctttgttgagtcaatggaaggatgagctg
gaaactcattcaacaccaaacagtttatctgtttttgttcattatggaggagagagaagc
aatgatccaaaagtgatagctgaacctactgttgttttaacaacttatggtgttctttct
gcatcttataaaacttactcagagaatagcatttttcataaagtggattggtatagagtg
gtgttagatgaagctcacactatcaagtcttcaaaaagtcaatgtgctcaagctgctttt
gccttgtcagcatattgtcgttggtgtttaactggtacccctcttcagaacaatttggaa
gatctttacagtcttctgtgtttcttacgtgttgagccatggtgcaattgggcatggtgg
aacaagttaattcagaagccatatgagaatgatgataaaagagggctaaagcttgtaaaa
gccattttaaggccactcatgcttagaagaacaaaagacacaaaggataaagaaggaagg
cccattcttgttcttccaccaacagacatacaagtgattgaatgcgaacaatcagaagct
gaacgtgatttctatgatgctttattcaagagatccaaagtccaattcgatcaatttgta
gcacaaggcaaagttcttcacaattacgctaacattctcgagcttctactcagattacga
caatgctgcaatcacccttttctagttatgagccgaggcgacacccaacaattttcggat
ctaaacaaactcgcaaaacgatttctcgatataaattccgattcttctgctccaaatcca
agtaaagcatacatcgaagaagtagtcaccgatttaaaaaaaggcgaaaacaccgaatgc
ccaatttgtctagaatcagcagacgaccctgttcttacaccatgtgcgcatcggatgtgt
cgggagtgtcttttatcaagctggagaagcccaattcaaggtttatgtccgatttgtcgg
caaaatttgagaaaaactgacctgattacatgccctactgagagtaaatttagggttgat
gttgagaagaattggaaagaatcttcgaaggttttgaagcttctggaatgtttggagagt
ataaggggaaaaggatttggagaaaaaagtattgtttttagtcaatggacttcgtttttg
gatcttttggagattccattgaagaggagaaagattgggtttttgagatttgatgggagt
ttatcacagaagaacagagaaaagactttgaaggagtttaatgagacttcagataaaatg
gtattgttaatgtcgttaaaagccggtggggttggattgaatttgacagcagcttctaat
gttttccttatggatccatggtggaatcctgcggtggaggagcaggcgattatgagaatt
catcgtattggtcaaaagcgaactgtttgtgttagaagatttattgtcaaggaaacggtg
gaggaaagaatgcaacaagttcaggcgaggaagcaacggatgattgcgggagctcttact
gatgaagaagttcggtcagctcgacttgaagaactcaagatgctttttagataa

DBGET integrated database retrieval system