Lactuca sativa (garden lettuce): 111919519
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Entry
111919519 CDS
T05352
Name
(RefSeq) polypyrimidine tract-binding protein homolog 3 isoform X1
KO
K14948
polypyrimidine tract-binding protein 2
Organism
lsv
Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lsv03041
]
111919519
Spliceosome [BR:
lsv03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
111919519
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Gene cluster
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
RL
RRM_PARP14_3
TGF_beta
Motif
Other DBs
NCBI-GeneID:
111919519
NCBI-ProteinID:
XP_023770838
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All DBs
Position
9:47296196..47299684
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AA seq
442 aa
AA seq
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MTEPSKVIHVRNVGHEISEPDLLQLFQPFGVINKLVMLRAKNQALLQMQDVPSAVNAMQF
YANVQPSIRGRNVYVQFSSHQELTTMEQNTQGRGDEPNRILLVTIHHMLYPITVEVLQQV
FSPHGYVEKIVTFQKSAGFQALIQFQSRQSAISARNSLQGRNIYDGCCQLDIQFSNLDEL
QVNYNNDRSRDFTNPSLPSEQKGRPSSQPGYGDAGGMYSLQGHEVGFPQMNNGAAIAAAF
GGGLPPGISGTNDRCTVLASNLNPDRIDENKLFNLFSLYGNIARIKLLRNKPDHALIQMG
DGFQSELAVHFLKGATLFGKRLEVNYSKHPHITMGAETHEYLNSNLNRFNRNAAKNYRYC
CSPTKMIHLSTLPQDITEEEIVAHLEEHGSIINTKLFEMNAKKQALVLFENEEQATEALV
CKHASSLGDSMIRISFSQLQTI
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgacagagccttctaaagtcattcacgttcggaatgttggtcacgagatttcggagcct
gatctacttcaactattccaaccttttggagtcatcaacaaactagttatgcttcgtgca
aaaaaccaggctctccttcaaatgcaagatgtcccttcagctgtgaatgcaatgcaattt
tatgccaatgttcaaccaagcataaggggtagaaatgtgtatgttcagttttcatctcac
caagagctaaccacaatggagcaaaatactcaagggcgtggagacgagcctaaccgtata
ctcctggttacaatccatcacatgctctaccctattactgtggaagtcctgcagcaagtc
ttttctcctcatggatatgtcgagaaaatcgtcacttttcaaaagtcagctggttttcaa
gcacttattcagtttcaatcacgccagagtgctatatctgcaagaaattcccttcagggg
cgtaatatttatgatggttgttgtcaactagatattcaattctcaaatcttgacgagttg
caagtgaactacaataatgatcggtctagagacttcacaaacccatcactgccttcagaa
caaaagggcagaccttcttctcaacctggatatggagacgcaggaggtatgtacagttta
caaggtcatgaagttggatttccacagatgaacaatggcgcagcaattgcagctgcattt
ggaggagggttgcctcctggaattagtgggactaatgacagatgcactgttcttgcatct
aatctaaatcctgataggatagatgaaaacaaactgttcaacttgttttctttatatgga
aacattgcccgaatcaagcttcttcgcaataaaccagatcacgcccttatccaaatgggt
gatggctttcagtctgaattagcagtacactttttaaagggggcaacattatttggaaag
agattggaggttaattattcaaaacatccacacatcacaatgggtgctgaaacgcatgag
tatttaaactcaaatcttaaccgatttaaccgtaatgctgctaaaaactatcgttactgt
tgctcgccaaccaaaatgatccacctgtccaccctaccacaggacataacagaggaggag
attgtggcccaccttgaagaacatgggagcatcatcaacactaagctttttgaaatgaat
gctaaaaaacaggctcttgttttgtttgaaaatgaagaacaggccactgaagctcttgtg
tgtaagcatgcaagtagccttggtgattccatgattcggatctcattttctcagttgcag
accatttga
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