Lactuca sativa (garden lettuce): 111919525
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Entry
111919525 CDS
T05352
Name
(RefSeq) protein GIGANTEA
KO
K12124
GIGANTEA
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
111919525
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NCBI-GeneID:
111919525
NCBI-ProteinID:
XP_023770848
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Position
9:complement(47515604..47521591)
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AA seq
1155 aa
AA seq
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MAVATSERWIDGLQFSSLFWPPPPDPEQRKAQITAYVDYLGQFTSEQFPEDIAELIRHRY
PSTEKRLFDDVLAMFVLHHPEHGHSVIHPIISCIIDGTIEYDRSTPPFASFISLICPSAD
NEYSEQWALACGEILRILTHYNRPIFKVEHPHGETDRSSSGSQASTSNPTDVQSSSSSSS
SSSPSGHHERKPLRPLSPWITDLLLAAPLGIRSDYFRWCGGVMGKYAAGELKPPSLVMAS
SRGSGKHPQLMPSTPRWAVANGAGVILSVCDEEVARYETATLTAAAVPALLLPPPTTAMD
EHLVAGLPALEPYARLFHRYYAIASPSATQRLLLGLLEAPPSWAPDALDAAVQLVELLRA
AEDYASGMRLPRNWMHLHFLRAIGTAMSMRAGIAADSAAALLFRILSQPALLFPPLRQVE
GGEVQHEQISGYISSHKKQRQMPVAEATIEATAQGIASMLCAHGPEVEWRICTIWEAAYG
LIPLSSSIIDLPEIIVATPLQPPILSWNLYIPLLKVLEYLPRGSPSEACLMKIFVATVEA
ILQRTFPAESPSQQTRKTRFVFGSASKNLAVAELRTMVHSLFLESCATVELSSRLLFVVL
TVCVSHEAQLHVGKKHSDSSPEPELESESSSRKRTNKQGPVAAFDSYVLAAVCALACELQ
LFPLISRASNRSNLKDGEKPSHEVKSMNGNGIGIGTGNGFQSSIDSAVSHTRRILAILEA
LFSLKPSSVGTSWSYSSNEIVAAAMVAAHISELFRRSKACTHALSVLIRCKWDKQIHSTA
SSLYNLIDIHSKAVASIVNKAEPLDIVHVAIKDPPPVSSSSSCFNGKRQNSCITQINDPV
ATSVKKASKLCEEGGIMSFPFNASELANILTMDRHIGFNCSARVLLRSVLTEKQELCFSV
VSLLWHKMIASPETQLNAVSTSAQQGWRQVVDALCNVVAASPTTAATAVVLQAERELQPW
IAKDDDVGQKMWRINQRIVKLIVELMRNHENLESLVILATALDLLLRATDGMLVDGEACT
LPQLELLEATARAVQPVLEWGESGLAVADGLSNLLKCRVPATVRCLSHASAHVRTLSVSV
LRAILNVGCIKVKQSGEQVNIGSSRHVAYMSGDVIDWEADLAKCLTWEAHSRMATGMPIE
YLETASKELGCPIFV
NT seq
3468 nt
NT seq
+upstream
nt +downstream
nt
atggcagttgctacatctgaaaggtggatcgatggtctacaattctcatcactgttttgg
cccccaccaccagatccagaacaaagaaaggcacagatcacagcatatgttgattatttg
ggccaattcacatcagagcaatttcctgaagatattgctgagttgattcgccatcgatat
ccatctactgaaaaacgcctgtttgatgatgtgttagcaatgtttgtacttcatcaccct
gagcatggacattctgttattcatcctataatttcatgcatcattgatggcacgattgag
tacgatagaagcactcccccatttgcttctttcatttcattaatctgcccaagtgctgat
aatgagtattccgaacaatgggcattagcatgtggagagattttacgaatattaacacat
tacaatcgaccaattttcaaagttgaacacccacatggtgaaacagatagaagcagcagt
ggtagccaagcatcaacaagtaaccctacagatgttcaatcctcttcttcttcttcttct
tcttcttcaccatctggacaccatgaaaggaaaccactaaggcctctgtctccttggatc
actgatttattgcttgctgcacctttaggtatcagaagtgactactttcgttggtgtggg
ggtgttatgggaaaatacgctgcaggggaactgaagccaccttctcttgtaatggcttct
tcacgtggatctggaaagcatccacagttaatgccatctacaccaaggtgggctgttgct
aatggagcaggtgtaattttaagtgtatgtgatgaggaagttgctcgttatgaaaccgct
actctaactgcagctgctgttcctgctctgttacttcctcctccaacaacagccatggat
gagcatcttgttgcagggcttcctgctttagagccttatgcaagactcttccatagatac
tatgctattgctagtccaagtgctactcaaagacttcttcttggattattagaagcacca
ccttcatgggctccagatgctcttgatgctgctgttcaactagtcgagcttcttagggca
gctgaagattatgcatccgggatgcggcttcctagaaactggatgcatttgcacttcttg
cgtgcaattgggactgcaatgtcaatgagagcagggattgcagctgactcagcagctgct
ttacttttccggatattgtctcaaccggctttgctttttcctcctcttagacaagttgaa
ggtggtgaagtccaacatgaacagattagtggttacatttctagccataaaaaacagaga
caaatgccagtggctgaagcaacgattgaagccacagcccaagggatagcttcaatgcta
tgtgcacatggacccgaagttgaatggagaatatgcacaatatgggaagctgcatacgga
ttaattcctttaagttcttccataatcgatcttccggaaataatcgttgcaacacctcta
caaccacctatcttatcatggaacctctacattcctctcctcaaagttctagaatatctc
cctcgcggaagcccatcagaagcatgtctcatgaaaatattcgttgcaacagtcgaagca
attctccaaagaacatttcccgctgagtcaccatcccaacaaacaagaaaaacacgattc
gttttcggctctgcctccaaaaatctagctgtcgccgagcttcgcacgatggtccactct
ctgtttctagaatcctgcgccacggtcgagttatcttctcgattacttttcgttgtatta
accgtctgtgtcagtcacgaagcgcaacttcacgtcggaaagaagcattccgattccagc
ccggaaccggagttggaatcagaatcgtcgtctcggaaaagaacaaacaaacaaggaccc
gtcgccgcgttcgattcctacgttctcgctgcggtttgtgctctcgcgtgcgagcttcag
ctctttccgttgatttcacgagcaagtaaccgttcgaatcttaaagatggtgaaaaacca
agtcacgaagttaaatccatgaacgggaatggaattggaatcggaactggaaatggattc
cagagtagtattgattctgcggtgagtcatacgcgacgtatactcgcgattctggaggcg
cttttttctttaaaaccgtcttctgttgggacttcttggagttacagttcgaatgagata
gtagctgctgctatggtggcagctcatatatccgagcttttcagaaggtctaaagcttgc
acacatgctctctcggttttaatccggtgcaaatgggataaacaaattcattctacagca
tcttcgctttataatctaattgatattcatagtaaagcagttgcatcgatagtgaacaaa
gcagaaccactggatattgtacatgtagctataaaggatcctcctcctgtatcatcatca
tcatcatgctttaatggtaaaagacaaaattcctgtatcacacagattaatgatccggtt
gcaacgagtgtgaagaaagcttctaagttatgtgaggagggaggaataatgagtttccca
ttcaatgcttcagagttagccaacattctcacaatggatagacacattgggtttaattgt
agtgcacgtgttcttttgagatcagttttaacagaaaaacaagaattatgtttttctgtt
gtttccttgttgtggcataagatgatcgcatcacctgaaacacaacttaatgcagtaagc
acatccgctcagcaaggatggagacaggtggttgatgcactgtgtaatgtggtggcagca
tcgccaacaacagctgcaactgcggttgttcttcaggcggagagggaattgcagccatgg
atcgcgaaggacgatgatgtgggtcaaaaaatgtggagaatcaatcaacggattgtgaag
ctgattgtggagttaatgagaaatcatgaaaatctcgagtcattagtgattctcgccact
gccttagacctcctcctacgtgccactgatggcatgcttgttgatggtgaagcatgcact
ttaccacaacttgagcttctggaagcaacagctagagcagttcagccggtgttagagtgg
ggagaatccggattggcggttgcagatggcctctcgaatcttctcaagtgtcgagtgcca
gctactgtaaggtgtttatctcacgcgagtgctcatgtacgcacactgagtgtgtcggtt
cttagagccattttgaatgttggttgtataaaagtgaaacaaagtggtgaacaagttaat
ataggtagtagcagacatgttgcgtacatgagtggtgatgtcatcgattgggaagctgac
ctggcaaagtgtttgacgtgggaagctcatagccggatggcaactgggatgccaattgaa
tatcttgagactgcttctaaggaattgggatgcccgatttttgtctaa
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