Lactuca sativa (garden lettuce): 111919621
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Entry
111919621 CDS
T05352
Name
(RefSeq) RNA-binding KH domain-containing protein RCF3 isoform X1
KO
K21444
poly(rC)-binding protein 3/4
Organism
lsv
Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsv03019
]
111919621
Messenger RNA biogenesis [BR:
lsv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
111919621
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Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
KH_KhpA-B
Motif
Other DBs
NCBI-GeneID:
111919621
NCBI-ProteinID:
XP_023770952
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Position
3:complement(118703770..118714033)
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AA seq
606 aa
AA seq
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MEDNIRPFKRPHNPIFENSINKRGKFSDEFSETSNSSETLYRILCHSRKIGSVIGKGGVI
IKALREKTQAKITIDDSIPGSEERVVIIYSPSTKKPVTHNDMNLQCAAQDALLKVHDKIL
EEDINNNEKLVTTRILVPNNMVGCLLGKKGDVIQRLRSETRANIRILPSDQLPVCALSTD
ELVQISAKPAIVKRALYEISTLLHHHPRKDNFIPSGPHGFHPPGPQITNLPPPARWRGDY
GSDHSRFGDTPSEFSMKILCSTAKIGGVIGKGGSNVRQIQQETGTDIHVDDVAADSDERV
ICVSSFEDLRNPRSRTIDAILFLQEKASDYSEKGIVSTRLLLPSSKVGCILGQGGHVINE
MRRRTKADIRVYSKQEKPKCASKDEELVKVSGIYGTVKDAVAEIASRYRERCLRDAKPEA
ESSPHGGRLAGYGPFTGSGRVYDEPRSYPPPTRDYELYSHLAPHRDYEPYSHQALVRDYE
GGGYRAPIREYESNDYVAPRVGYPSPLRDYEYEPQGYQRFLRGVDMKMSSSSRGFSIGNA
SEITGTRPYGGASESSTADIHDPSQHLNSTHESYQIYNLPKHPSHTNTNPTSHTPYNHYS
QKSYHI
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atggaagataacattcgcccattcaaaagaccccataaccccatttttgagaatagtatc
aataaaagaggcaaatttagtgatgaattttcagaaacctctaattcttcagaaacactc
taccgaatactatgccactctagaaaaatcggtagtgtaattggaaaaggtggagtgata
atcaaggccttacgtgaaaaaactcaagctaaaatcacaattgacgattctatccctgga
tcagaagaaagagtagtcataatctacagtccctcaacaaaaaagccagtaacacataat
gatatgaatctccagtgtgctgcacaagatgctttgttaaaagttcatgataagattctt
gaagaagatataaataataatgaaaagttggtcactacacgaattcttgttccaaataat
atggtggggtgtcttttgggaaaaaaaggagatgttattcagagattgagaagtgaaact
cgtgcaaatatacgtattttgccttcagatcagcttcctgtttgtgctttgagtactgat
gaattggttcagatatcagctaaaccagctattgtaaaaagggctctctatgaaatttct
accttgttacatcatcatccacgcaaggacaacttcattccttccgggccccacggattt
catccacctggacctcaaattacaaatctacccccgcctgccaggtggcggggggattat
ggcagtgaccactcacgatttggtgatactccttctgagttttcaatgaaaattctttgt
tccacagcaaaaatcggaggggtgattggtaaaggtggctcaaatgtcagacaaattcaa
caagaaactggaaccgatatacatgttgatgatgtggcagctgactcagatgagcgtgtg
atttgtgtgtcatcgtttgaggatttgaggaatccgaggtcaagaacgatcgatgcaatt
ctttttttacaagagaaagcgagtgattattccgagaaaggaattgttagtacaagatta
cttttgccatctagtaaagtcggttgcattcttgggcaaggtggacatgtgattaatgaa
atgagaaggagaacaaaagcagatattcgtgtttactctaaacaagaaaaacctaagtgt
gctagtaaagacgaagagcttgtaaaggtgtctggaatttatggtacggttaaagatgcg
gtagctgagattgcatcaagatatcgagaaagatgtcttcgtgatgcaaaacctgaagcg
gaatcatctcctcatggtggtcgcttagctggctatggaccttttacaggtagtggaagg
gtgtatgatgaaccacgtagctatccacctcctacaagggactatgaactttatagtcac
ttggctccacatagggactatgagccttatagtcatcaagctcttgtaagggattatgaa
ggtggtggatatagggctcctattagggagtatgaatctaatgactatgttgcccctcgt
gtgggttacccttcacctctaagggactatgagtatgaacctcagggttaccaaagattc
ttacgtggtgtggatatgaagatgtcgagtagcagtagaggtttttctattgggaatgct
agtgagataacgggaacaagaccatatggcggggcttcagaatcctccactgctgacatc
catgatccatcacaacatttaaattccacccatgaatcctaccaaatctacaatttacca
aaacacccttcacacaccaatactaatcccacttcacacacaccatacaatcattactca
caaaagtcttaccacatctaa
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