Lactuca sativa (garden lettuce): 111919647
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Entry
111919647 CDS
T05352
Name
(RefSeq) uncharacterized protein LOC111919647
KO
K22379
E3 ubiquitin-protein ligase RNFT1 [EC:
2.3.2.27
]
Organism
lsv
Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lsv04121
]
111919647
Enzymes [BR:
lsv01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
111919647
Ubiquitin system [BR:
lsv04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
111919647
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_3
zf-C3HC4
zf-C3HC4_2
zf-RING_UBOX
zf-RING_5
zf-rbx1
zf-C3HC4_4
Prok-RING_4
zf-RING_6
zf-RING_16
zf-ANAPC11
RING_XB3-XBAT31
zf-Nse
zf-C3H2C3
Sina_RING
zf-RING_11
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
111919647
NCBI-ProteinID:
XP_023770982
LinkDB
All DBs
Position
8:complement(16038396..16041070)
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AA seq
462 aa
AA seq
DB search
METTGLSVDTTNSDAYETDNLASSNSLTPRITSRSSSSRRMTPSSSFSVIRFLQAPVTTV
LEYSGVLRPRSNNDYHESESLIHDHHHHHDARSSSDSDTATSSNGDNGEVSIRIIGAVDP
EEQHGGEGGEPVALNGGDNDGGEREMADSTDVDGENGRSGSHSDSSYQQRYDMQQVSRWI
EQILPFSLLLLIVFIRQHLQGFFVTVYVTAFMYKSNDILRKQTALKGERRLSVLGGYFIV
FILHVIGVYWWYQNDDLCYPLFMVPPRAIPPFWHAIFTILVNDTMVRQTAMAFKLVLLMY
YKNGKGHNFRRQGQMLTVIEYALLLYRAFLPAPVWYRFFLNKEYGSLFSSLTTGLYLTFK
LTSIVEKVGSFWTALKALSRKEVHYGSYATPDQVIEAGDMCAICQEKMQAPVLLRCKHIF
CEDCVSEWFDRERTCPLCRAVVKPAEIRSYGDGSTTLFFQLF
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atggaaacaacaggtttgagcgttgataccaccaattccgatgcgtatgagactgataat
ttagcttcatcaaactctttaacaccgaggattacgagtcgaagtagttcttccaggagg
atgacgccgtcttcttcgttttctgtaattcgatttctacaagcgcctgtaactactgta
cttgaatattctggtgttcttcgacctaggtcaaacaacgattaccatgaatcagagagt
ttgattcatgatcatcatcatcatcatgatgcccgtagttcgagtgattcggatacggct
acgagcagtaatggcgataatggggaggtttctatacggataatcggtgcggtagatcca
gaagaacaacatggtggggagggtggagaaccggtggccttgaatggcggcgataatgat
ggaggagagagagagatggctgattccaccgacgtagatggtgaaaatggcaggagtggg
agtcatagtgattcatcttatcaacagcggtatgatatgcaacaggtttcgaggtggatt
gaacagattcttccattttctttgctgttgttgatcgtgttcattcgtcagcatttgcaa
ggtttctttgtcacagtctatgtaactgctttcatgtacaagtctaatgatattcttcga
aagcagacagctttaaagggggagagaagactctctgttcttggtggttattttatagtt
tttatccttcatgtaattggagtatactggtggtaccaaaacgatgatctttgttaccca
ttgttcatggttccaccaagagcaattccaccattctggcatgctatattcaccatcctt
gtgaatgatacaatggtgaggcagacagcaatggcttttaagcttgtattgcttatgtac
tataaaaatggcaaagggcataactttcgtagacagggtcaaatgctgactgtgattgag
tatgcactgctgttataccgtgcatttttacctgctccagtttggtatcgattcttttta
aacaaagaatatggaagcctcttttcctctttgacaacaggcttatatctaactttcaag
cttacatcaatagttgagaaggttggatccttctggactgcattgaaggcgttgtcaaga
aaagaagtccattatggatcctacgcgacaccagaccaggtaattgaagcaggggacatg
tgtgctatttgtcaggaaaagatgcaagctccagttttattacgttgtaaacacattttc
tgtgaagattgtgtttcagaatggtttgatagagaaagaacatgccctttatgcagagct
gtggtgaaaccagcagaaatacgttcatatggggatggatccacgactttgtttttccag
ttgttttaa
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integrated database retrieval system
