KEGG   Lactuca sativa (garden lettuce): 111919730
Entry
111919730         CDS       T05352                                 
Symbol
LOC111919730
Name
(RefSeq) DNA sliding clamp PCNA
  KO
K04802  proliferating cell nuclear antigen
Organism
lsv  Lactuca sativa (garden lettuce)
Pathway
lsv03030  DNA replication
lsv03410  Base excision repair
lsv03420  Nucleotide excision repair
lsv03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:lsv00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    111919730 (LOC111919730)
   03410 Base excision repair
    111919730 (LOC111919730)
   03420 Nucleotide excision repair
    111919730 (LOC111919730)
   03430 Mismatch repair
    111919730 (LOC111919730)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:lsv03032]
    111919730 (LOC111919730)
   03400 DNA repair and recombination proteins [BR:lsv03400]
    111919730 (LOC111919730)
DNA replication proteins [BR:lsv03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    111919730 (LOC111919730)
DNA repair and recombination proteins [BR:lsv03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     111919730 (LOC111919730)
   MMR (mismatch excision repair)
    Other MMR factors
     111919730 (LOC111919730)
  TLS (translesion DNA synthesis) factors
   Other TLS factors
    111919730 (LOC111919730)
SSDB
Motif
Pfam: PCNA_C PCNA_N Rad9 Porin_OmpL1 HTH_ParB_Mtase
Other DBs
NCBI-GeneID: 111919730
NCBI-ProteinID: XP_023771080
LinkDB
Position
8:18937998..18939857
AA seq 345 aa
MLELRLVQGSLLKKVMESIKDLVNDANFDCSATGFSLQAMDSSHVALVSLLLRSEGFEHY
RCDRNLSMGMNLGNMAKMLKCAGNDDIVTVKADDGGDCVTFMFESPNQDKIADFEMKLMD
IDSEHLGIPEAEYEAIVRMPSAEFARICKDLSTIGDTVVISVTKEGVKFSTRGDIGTANI
VLRQNTSVDKPEEATIIEMETPVSLTFALRYMNSFTKATPLASQVTVSLSSELPVVVEYK
IAEMGYLRFYLAPKIEEDEEMGGGHQAEPKKQPEKKPKTEPKSNGEGAPKRRVLKVDLDE
EEEETKPQVVKKSGSENGDYVEVLDVKAGTGVIEPKTEVEVMDVE
NT seq 1038 nt   +upstreamnt  +downstreamnt
atgttggaactaaggttggttcagggcagtcttttgaagaaagtgatggaatccataaag
gatctggtgaacgacgccaactttgactgttcggcgacaggattctcactgcaggccatg
gattcaagccatgtagcgcttgtctcactcctactcagatctgagggtttcgagcactac
cgatgcgatcgtaacctctcaatgggaatgaatctcggtaacatggcaaaaatgctaaaa
tgcgccggcaatgacgacattgtcaccgtcaaggctgacgacggcggcgactgcgtcacc
ttcatgtttgaaagccctaatcaagataagattgctgattttgagatgaagctgatggat
attgatagtgaacatcttggaataccagaagcagaatatgaagccattgtccgaatgcca
tctgcagagtttgcaagaatctgcaaagatcttagcaccataggagacactgttgtgata
tctgtcaccaaagaaggtgtaaaattttccaccagaggtgacattgggactgcaaacatc
gtcttaagacaaaatacttctgttgacaagccagaagaagcaactataatcgaaatggag
acaccagtttccttaacatttgctttaaggtacatgaactccttcaccaaggcgactcca
ttagcaagccaagtgacagtgagtttgtcttctgagctgccagttgtggtggaatacaaa
attgcagaaatgggttatctaagattctatttggctccaaagattgaagaagatgaggag
atgggcggtggtcatcaggctgagcccaagaaacaaccagagaagaaaccaaagactgag
cctaaatcaaatggagaaggggctcctaaacgacgtgtcttgaaggtagatcttgatgaa
gaagaagaggaaactaaaccacaggttgtgaagaaatctggaagtgagaatggtgattat
gttgaagttttggatgttaaggctggaactggtgttattgagccaaaaacagaggttgaa
gtaatggatgttgagtag

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