Lactuca sativa (garden lettuce): 111919730
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Entry
111919730 CDS
T05352
Symbol
LOC111919730
Name
(RefSeq) DNA sliding clamp PCNA
KO
K04802
proliferating cell nuclear antigen
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv03030
DNA replication
lsv03410
Base excision repair
lsv03420
Nucleotide excision repair
lsv03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
111919730 (LOC111919730)
03410 Base excision repair
111919730 (LOC111919730)
03420 Nucleotide excision repair
111919730 (LOC111919730)
03430 Mismatch repair
111919730 (LOC111919730)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lsv03032
]
111919730 (LOC111919730)
03400 DNA repair and recombination proteins [BR:
lsv03400
]
111919730 (LOC111919730)
DNA replication proteins [BR:
lsv03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
111919730 (LOC111919730)
DNA repair and recombination proteins [BR:
lsv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
111919730 (LOC111919730)
MMR (mismatch excision repair)
Other MMR factors
111919730 (LOC111919730)
TLS (translesion DNA synthesis) factors
Other TLS factors
111919730 (LOC111919730)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PCNA_C
PCNA_N
Rad9
Porin_OmpL1
HTH_ParB_Mtase
Motif
Other DBs
NCBI-GeneID:
111919730
NCBI-ProteinID:
XP_023771080
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All DBs
Position
8:18937998..18939857
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AA seq
345 aa
AA seq
DB search
MLELRLVQGSLLKKVMESIKDLVNDANFDCSATGFSLQAMDSSHVALVSLLLRSEGFEHY
RCDRNLSMGMNLGNMAKMLKCAGNDDIVTVKADDGGDCVTFMFESPNQDKIADFEMKLMD
IDSEHLGIPEAEYEAIVRMPSAEFARICKDLSTIGDTVVISVTKEGVKFSTRGDIGTANI
VLRQNTSVDKPEEATIIEMETPVSLTFALRYMNSFTKATPLASQVTVSLSSELPVVVEYK
IAEMGYLRFYLAPKIEEDEEMGGGHQAEPKKQPEKKPKTEPKSNGEGAPKRRVLKVDLDE
EEEETKPQVVKKSGSENGDYVEVLDVKAGTGVIEPKTEVEVMDVE
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgttggaactaaggttggttcagggcagtcttttgaagaaagtgatggaatccataaag
gatctggtgaacgacgccaactttgactgttcggcgacaggattctcactgcaggccatg
gattcaagccatgtagcgcttgtctcactcctactcagatctgagggtttcgagcactac
cgatgcgatcgtaacctctcaatgggaatgaatctcggtaacatggcaaaaatgctaaaa
tgcgccggcaatgacgacattgtcaccgtcaaggctgacgacggcggcgactgcgtcacc
ttcatgtttgaaagccctaatcaagataagattgctgattttgagatgaagctgatggat
attgatagtgaacatcttggaataccagaagcagaatatgaagccattgtccgaatgcca
tctgcagagtttgcaagaatctgcaaagatcttagcaccataggagacactgttgtgata
tctgtcaccaaagaaggtgtaaaattttccaccagaggtgacattgggactgcaaacatc
gtcttaagacaaaatacttctgttgacaagccagaagaagcaactataatcgaaatggag
acaccagtttccttaacatttgctttaaggtacatgaactccttcaccaaggcgactcca
ttagcaagccaagtgacagtgagtttgtcttctgagctgccagttgtggtggaatacaaa
attgcagaaatgggttatctaagattctatttggctccaaagattgaagaagatgaggag
atgggcggtggtcatcaggctgagcccaagaaacaaccagagaagaaaccaaagactgag
cctaaatcaaatggagaaggggctcctaaacgacgtgtcttgaaggtagatcttgatgaa
gaagaagaggaaactaaaccacaggttgtgaagaaatctggaagtgagaatggtgattat
gttgaagttttggatgttaaggctggaactggtgttattgagccaaaaacagaggttgaa
gtaatggatgttgagtag
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integrated database retrieval system