Lactuca sativa (garden lettuce): 111919772
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Entry
111919772 CDS
T05352
Name
(RefSeq) sister chromatid cohesion 1 protein 1
KO
K06670
cohesin complex subunit SCC1
Organism
lsv
Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lsv03036
]
111919772
Chromosome and associated proteins [BR:
lsv03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
111919772
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Gene cluster
GFIT
Motif
Pfam:
Rad21_Rec8_N
Rad21_Rec8
Motif
Other DBs
NCBI-GeneID:
111919772
NCBI-ProteinID:
XP_023771132
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Position
8:17174755..17179151
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AA seq
632 aa
AA seq
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MFYSHQLLARKAPLGQIWMAATMHAKINRRKLDKLNIINICEEILNPSVPMALRLSGILM
GGVVIVYERKVKLLYEDVTRFLVEINEAWKVKTVRDPTILPKGKSHAKYEDVTLPDNIPT
DLGEIEQPLQFSNSETQREFHRSAYTEMKLDSINEAYISHNQGKKDIPQDHHQANIDDIT
MCDKFDSHQTEAGLFNLFERFDIDEDEETQVNSAFHDHTDIPNTLIPSPPPQEEPQIQNP
DEIHEQHPGEVPNPQVSDEDKAQYNSPHNSPQRRKPTRRTTRRVTTTLMDHGQTIIPGPM
YQFWLQNTSDIVSRRGQKRKLMRNNTHSVKIARLMDLPPVSLVCGLVGNNDIYYPLPILK
LWTKSIQPLHDSPSGNNSPPHPPAPSSSSPPERNNYHDPISPPFEDNHGEVGSGSLGVSI
ENIRVNIMDNNEVMPPSIPMEKSTTNHVNSGVSVSAVNRGTVTPSNSGDDVRSMPSAEIA
AHGSDVNSGRSNKKRLFSSTRRRSGSNLEPVVEELYGNYSDPIFKLSELSENQISSDLVV
ETGTGPTQTQKDPIPDQPVEQLTDSIRMQLKMHFDAPGSPQTESLNQLALGLNRKAAAGL
FYQTCVMATRCFIRVEQRVAYGDILISRGAKM
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atgttttactctcaccagctccttgctcgcaaagctcctctcggacaaatctggatggcg
gcaacaatgcatgcgaaaatcaataggaggaagctcgacaagcttaacatcatcaacatc
tgtgaagaaattttgaatccatcagttccaatggctctcagattatctggaattctcatg
ggtggagtcgttattgtctacgagcgcaaagtaaaacttctctatgaggatgtgactcgt
tttctggtggaaatcaatgaagcatggaaggttaaaactgttcgagatcctaccatactt
cctaagggcaagtctcatgccaaatatgaagatgtcacactccctgataacatacccaca
gacctaggagaaattgagcaacctcttcagttttctaactcagaaacacaaagagagttt
catagaagtgcttatactgaaatgaaacttgacagtataaatgaagcctacatcagccac
aaccagggcaagaaagatatccctcaggatcatcatcaagctaatattgatgatatcaca
atgtgtgacaaatttgattcacaccagactgaagcaggtctcttcaatctttttgagagg
tttgacatcgatgaggacgaagaaacacaagtgaattcagctttccatgatcatactgac
ataccaaatactcttatcccctctccacctccacaagaagaaccccaaattcaaaaccct
gatgagatccatgagcaacacccaggagaagttcccaatccccaagtttctgatgaagat
aaggcacagtacaacagtccacacaacagtccacagaggcgaaaaccaaccagaagaact
acaagaagagtcacaactactttaatggatcatggacaaactataattcctggaccaatg
tatcaattttggcttcagaatacttctgatattgtctcaagaagaggacagaagagaaaa
ctcatgcgcaataacacacactctgtaaagatagccagactcatggatctaccaccagtt
tctcttgtttgtggcttggttggaaacaatgatatttattatcctcttccaatattaaaa
ctgtggacaaaaagcattcaacctttgcatgattctccttcagggaacaactcgccacct
catccaccagcaccatcatcatcatcacccccagaaagaaacaattatcatgacccaata
agccctccttttgaagataaccatggtgaagttggatctggatcattaggggtatccata
gagaatataagggtaaatattatggataacaatgaggtgatgcctccttcaatccccatg
gaaaagtcaacaaccaaccatgtcaacagtggagtaagtgtatctgcggtcaacaggggg
actgttacaccgtcaaattcaggtgacgatgttagatccatgccaagtgcagaaattgca
gcacatggctcagatgtcaactctggaaggtcaaacaagaagagacttttctcatcaact
agacgaagaagtgggagtaaccttgaaccagttgtagaggagctgtatgggaattactct
gatccaattttcaagctatctgaactatcagaaaaccaaatttcatcagatctggtggta
gaaactggaacaggaccaacacaaacacaaaaagaccccatacctgatcaaccagtggag
cagttaactgattctatccgaatgcaactgaagatgcattttgatgcaccggggtctcct
caaacggaatcacttaaccagcttgcattgggattgaacaggaaagcagctgctggttta
ttttatcagacttgtgttatggcgacccgttgtttcataagggtggaacagagagtcgct
tatggagacattctaatttctaggggtgccaagatgtga
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