Lactuca sativa (garden lettuce): 111919775
Help
Entry
111919775 CDS
T05352
Name
(RefSeq) uncharacterized protein LOC111919775 isoform X1
KO
K08518
syntaxin-binding protein 5
Organism
lsv
Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lsv04131
]
111919775
Membrane trafficking [BR:
lsv04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
111919775
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
111919775
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
WD40_WDHD1_1st
ANAPC4_WD40
WD40_CDC20-Fz
Beta-prop_HPS5
WD40
WDR55
WD40_Prp19
Beta-prop_IFT140_1st
Synaptobrevin
Beta-prop_RIG_2nd
TFIIIC_delta
Beta-prop_CAF1B_HIR1
NBCH_WD40
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
111919775
NCBI-ProteinID:
XP_052621975
LinkDB
All DBs
Position
8:17454996..17462638
Genome browser
AA seq
1109 aa
AA seq
DB search
MFAKLFHKTPQQPSQQEDDDPRLKDFEPRVVVHYGIPTTASILAFDPLQQLLAIGTLDGR
IKVIGGDNIECLLISPKPVPLKNLEFIQNQGFLVSVSNENEVQVWDLERRQLAANLQWGS
NISAFSVICSTNYMYVGDEYGYLSVLKYDIEEGNIQPMSYQIPPDLIADGGGVQIPEHQS
VVGLLAQPCSTGKRVLIAYQNGLIILWDVSEDKALLIRGYKDLQLKDEIVIRSNNDIKRE
SINYKSDEEQIEKEISALCWVSPDGSILAVGYVDGDIILWNLSTNNQKTNKNTKNAVKLK
FSSSDKRLPVIVLHWCPNSQRNGSGQLFVYGGDDIGSEEVLTILNLDLSSGIEALKFIKR
FDLTLDGSYADIELVPNVGATESNCTSLFVLTNPGQLHVYDDECLTGLTSGPSVKPVQCP
VTIPTVEPNMTISKLCSVPKDGDFQRVLNETVLAVKSELASPKTPGSGKWPVTGGFQSQL
SSDENIGVERIYIAGYQDGSVRIWNATFPVFSLIFTLELQVEDTEGTEVPGASEPISALD
FNSKTSSLAVGNNCGLVNLLKLVGETKETNVPLVTETERQEIDLHHGNGWQSTAVISVLN
SPIRTLQYTFSGAKIIVGHECGKAAVLDVQSSSVLFLTDCLVDPSSPIVSLAMKTYLQTD
TNVPEQSGNTSTSGPETEVAFLLTKDSHIIFLDSNNGNKICCSSVNPKESTAISVYILDE
SFSVPELPEENPANTSQETTNEKESLKSTEPESESTEAEEKTSSQPIEPWKNFVDSLILI
CCEDSLLLYSTKSLLQEKPNFICKIDLEKQCRWTTIFKKNEVESGVVLVYSTGIVEIRSL
PDLKVVAETSLMSILRWNFKTKMENTMSSFGNGHIAMVYGCESSVLSLFSSENDFRIPEG
LPRLHDKVVAEAKEAAYKFALSQRKQNAPTGLLGGIIKGIKRDKGNETENIEETRDVLVP
KLETLFSRTPFSVSDLDLDLDLDLGDHELDMPTKLVVERIEAEPKSPSPPSPAPAKTEKN
KQVERDRLLEGGSEPKARTTDEIKAKYRKTDIAGAAAAAQEAKDKLLERQMKLEKLKENA
EELESGSENFASMAEQLAKQMENRKWWQL
NT seq
3330 nt
NT seq
+upstream
nt +downstream
nt
atgtttgctaaattatttcacaaaactccgcagcaaccatcacaacaggaggatgatgat
ccacgattgaaagactttgaaccacgtgttgttgttcattatgggatcccaactactgca
tcaatcctggcctttgacccccttcagcagttactagctataggaacactggatggcagg
ataaaggtgattggtggtgataacattgaatgccttttaatatctccaaagccagtaccc
ttgaaaaacctagagttcatacaaaaccaagggtttcttgtcagtgtctcaaatgaaaat
gaagtacaggtttgggatctagaacggaggcagttggctgctaatttacaatggggatcc
aatataagtgcattctctgtaatttgtagcaccaattacatgtatgttggagatgagtat
ggatatttgtctgtgttgaagtatgacattgaagaagggaatatccaacccatgtcctat
cagattcctccagatctcatagctgatggaggtggggttcaaatacctgagcatcagtct
gttgtgggacttcttgcccaaccgtgttccactgggaagagagtgctgattgcatatcaa
aatgggttgataattttatgggatgtttctgaagataaagctttactcatcagaggctat
aaagatctccaactgaaggacgaaatagtaattcgttctaacaacgacatcaagcgtgaa
agtataaattataaatcagatgaagagcagatagaaaaggaaataagtgctctctgttgg
gtttctccagatgggtcaatactcgctgttggttatgtagatggagatattatattatgg
aatttatccactaacaatcagaaaacaaataaaaatacaaaaaatgctgttaagttaaaa
ttctcttcaagtgataaaagactcccagttattgttcttcattggtgtccaaatagtcaa
cgtaacggatccggtcaactctttgtctatggaggcgatgatattggatctgaagaagtc
ctaacaattttgaatcttgatttgtcatcagggatagaagctttgaagtttattaaacgt
tttgacctaacacttgatggctcttatgctgatatagaattggtaccaaatgttggtgca
acagaaagtaattgcacttcactctttgtgttgaccaacccaggtcaactccatgtgtat
gatgatgaatgtttgaccggattaacatctggtccatctgtaaaaccagttcaatgccct
gtaacaataccaactgttgaaccgaatatgactatttcaaagctatgttctgtacccaaa
gatggggattttcaaagagttctcaatgagacagttttggctgtgaaaagtgaattagca
tcacctaagactccagggagtggaaagtggcctgtgactggtggctttcaaagtcaacta
tcttcagatgaaaatattggagttgagaggatatatattgcaggttatcaagatggctct
gttagaatatggaatgccacatttccagttttctccctgatttttacacttgagttgcag
gtggaagatactgaaggaaccgaagtcccaggtgcaagtgaaccaatatcagccttggat
tttaactcaaagacatcaagtttagctgttggcaataattgtggtctggttaatctactc
aagttagttggagaaaccaaagaaacgaatgttccccttgtgacagaaaccgaacgtcaa
gaaattgatttgcaccatgggaatggatggcaatcaacagctgtcatttctgttctaaat
tcacctatacgaacccttcaatatacattttctggagctaaaattattgttggacatgaa
tgcggtaaggctgctgtacttgatgttcaatcatcatcagtactgtttcttactgactgt
ttagtcgaccctagctctccaattgtttctcttgccatgaaaacatatttacaaactgac
actaatgttccggaacaatctggaaacacatctacaagtggtccagaaacagaagtggct
ttcttattgaccaaagattcacacatcatctttttggatagtaataatggtaacaagatc
tgttgctcttcagtaaaccctaaagaatcaactgcaatctcggtatacattttagatgaa
agtttttctgtcccagaattacctgaagagaatcctgcaaacacatcccaggaaactaca
aatgaaaaagagtctttaaagtcaacagagccagaaagtgagtcaacagaagctgaagaa
aaaacctcgagtcaacccattgaaccatggaagaattttgtagattcactcattttaatt
tgctgtgaggattcactgcttttatactcaaccaagtctctacttcaggagaagccaaac
ttcatctgcaaaattgatttggagaaacaatgtcgctggactacaattttcaagaaaaat
gaagtggaatctggagtggttttagtgtattcgactggaattgttgaaatcaggtcattg
ccagatcttaaagtggtggcagaaacttctctaatgtccattctcagatggaactttaaa
actaaaatggagaacacaatgagctcttttggtaatggccatattgcaatggtgtacggg
tgtgaatcttctgttttgtctcttttctcctctgaaaatgacttcaggataccggagggt
ttacctcgccttcatgataaagttgtggcagaagctaaagaggctgcatataaattcgct
cttagccagagaaaacagaatgcaccaacgggattacttggtggtatcattaagggaata
aagagagataagggaaatgaaactgaaaatatagaggaaactcgagatgttcttgttcct
aagcttgaaaccttgttttcaagaacaccattttcagtttcagatttggatttggattta
gatttagatttgggagatcatgagctcgatatgccaaccaaattagttgttgaaagaata
gaggctgaacctaaatctccttcgccaccatctccggctccagctaaaactgagaaaaac
aagcaagtggagagagatagattacttgaaggtggctcagaaccaaaagctaggacaaca
gacgaaatcaaagctaaatatcgaaaaacggatatagcgggtgcagctgctgcagctcaa
gaagcaaaagacaagcttctagagcgacagatgaaacttgagaaattaaaagaaaatgcg
gaagaactggaaagtgggtccgagaattttgcatcaatggcagaacaacttgcaaagcaa
atggaaaatagaaagtggtggcagctttga
DBGET
integrated database retrieval system
