Lactuca sativa (garden lettuce): 111919845
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Entry
111919845 CDS
T05352
Name
(RefSeq) ABC transporter G family member 29
KO
K08711
ATP-binding cassette, subfamily G (WHITE), member 2, PDR
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
111919845
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lsv02000
]
111919845
Transporters [BR:
lsv02000
]
ABC transporters, eukaryotic type
ABCG (White) subfamily
ABCG2, 3 subgroups
111919845
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC2_membrane
ABC_tran
PDR_assoc
ABC2_membrane_7
AAA_21
ABC2_membrane_3
ABC_trans_N
AAA_16
AAA_29
AAA_33
AAA_18
RsgA_GTPase
AAA_22
AAA_28
AAA_30
AAA
nSTAND3
Zeta_toxin
ABC_ATPase
RuvB_N
NTPase_1
DO-GTPase1
T2SSE
Motif
Other DBs
NCBI-GeneID:
111919845
NCBI-ProteinID:
XP_023771181
LinkDB
All DBs
Position
1:203237127..203262019
Genome browser
AA seq
1401 aa
AA seq
DB search
MFCSAQNLLNRSSSHVGEDEEALKRAAMEKLPEFDHLRASITESCVLKQVKEKDEKIENQ
LFIDKLLNVVEEDNGKLLKKIRERYDKAEVTLPTVEVRYEHLNVEADCFIGDRALPTLGN
TLRNIAESALTFLGIRLSKSTKLTILSDASGIIKPSRMTLLLGPPSSGKTTLLQALAGKL
DSSLKVEGKVTYNGHTLKEFVPQRTCAYVSQHDVHVAEMTVKETLDFSARCQGTGSYNEL
LAELERREKVDGILPEPEVDLFMKAIAMEGTDNNLITHYILKILGLDICGDTIVGNEMIR
GISGGQKKRVTTGEMMVGPTKTLFMDDISTGLDSSTTFQIVKCLQKIAHLTKATIFISLL
QPPPETFHLFDDIILLSQGHIVYHGPREHTLEFFESCGFKCPERKGHADFLQEVTSRKDQ
EQYWVDRRKPYKYISVPQLSEQFKRFNIGLQLQNDLSLAYNKASSQKSALVFKKYLVPKK
ELLKASFQKELLIMKRNSPIYIFKIIQTTIVAIIGATVFLKTNMHTNNEEDGGIYVGALL
FSLITNTFNGFGELPMIIERLPVIYKQRDLLFHPPWAFTIPTFLLGLPISIIDSTVWTVV
TYNVIGFAPEATRFLKQWLLTFMIQQMAGGLFRLIASICRTMTIANTGGVLVVELAFLVG
GFIIPKGQIPKWWGWAYWVSPFSYGFNAFTINEMFAPRWMNKMASDNVTELGVAVLRTFD
VTPDKNRFWIGVAVLLGFAVVFNFLFTLSLTYLNPLGKAQAVISKETLNENAKENSSISA
TNPIDSTRGIVLPFTPLIMSFSNINYYVDMPPEMEVQGIKDDKLQLLQEITGAFRPGVLT
ALMGVSGAGKTTLMDVLAGRKTGGLIQGDIRISGFPKKQETFARVSGYCEQTDIHSPQVT
VYESLIFSAFQRLPKEASKEVKLHFVSEIMDLVELDNLKDSIVGIAGVTGLSTQQRKRLT
IAVELVANPSIIFMDEPTSGLDARAAAIVMRTIRNTVDTGRTVVCTIHQPSIDIFEAFDE
LLLLKRGGQVIYFGPLGQNSEKIINYFEEIPGVPKLKSQYNPATWMLEVTSDSTESRLGT
DFSEHYRSSPLYKANNILVEQLSKPTSRAKDLIFKTKYSQSTWGQFKCCIKKQWSSYWRT
PDYNLVRFFFALVTALLLGTIFWKVGTKRDNSTDLATIIGAMYVAVMFAGFNNCVTIIPV
ASLERTVFYREQAAGMYSALPYAMAQVIVEIPFVLVQTIYYTIIVYAMVSFEWTVAKFFW
FFFISFFTFLYFTYYGLMIVSITPNHQAASIFAAAINVLFNLFSGFFIPRPRIPKWWIWY
YWICPLQWTIQGLIISQYGDLNETINVPGMSYDPTIQWYVQNYFGYQADALGSVATILVV
FTVFFALMYAYCLHKLNFQIR
NT seq
4206 nt
NT seq
+upstream
nt +downstream
nt
atgttctgctcggcccagaatctattaaacagaagtagtagtcatgttggagaagatgaa
gaagctctcaaacgagcagctatggagaaacttccagaatttgatcatttaagagccagt
ataactgaatcttgtgttctaaaacaagtcaaagagaaggatgaaaagattgagaatcaa
ctttttatcgacaaattgcttaatgttgttgaggaagataatggcaagttgttgaagaag
atcagagaacgatatgataaagctgaagttacccttccaacagttgaagtaagatacgaa
catttgaacgtagaagctgattgcttcattggtgatagagctctaccaactttgggaaat
acactccgcaacatagctgagtcagctttgacttttcttggaattagactttccaaaagc
acaaaactcacaattctctcggatgcttctggaatcattaagccttcaaggatgacactt
ctattgggcccaccctcctctggaaagacaacacttctacaggctttggctggaaagtta
gactctagcttaaaggttgaaggtaaagtaacatacaatggacatacactcaaagaattt
gtaccacaaaggacatgtgcatatgttagtcaacatgatgttcatgtagcagaaatgaca
gtcaaagaaacacttgacttttctgcaaggtgccaaggaacaggatcttataatgagttg
ctagctgaacttgaaagacgagagaaggtggatggtatacttcctgaacctgaagtcgat
ctctttatgaaggctattgctatggaaggaacagacaacaatctaattacccactacatt
cttaagatcttgggacttgatatatgcggagatacaattgttggtaatgaaatgattaga
ggaatatctggaggacagaaaaagcgtgttacaacaggagaaatgatggttggacctaca
aaaacactcttcatggatgacatatcaacaggattagacagttcaacaacatttcaaata
gtcaagtgtttacaaaagattgctcacctcacaaaggccaccatcttcatctccctcctc
cagcctccaccggagacatttcatctatttgatgacatcatccttttatcacaaggccac
attgtttatcatggcccaagagaacacactcttgagttttttgagagttgtggattcaaa
tgtccagaaagaaaaggacatgctgacttcctgcaagaggttacctcaagaaaagatcaa
gagcaatattgggtagatagaagaaaaccgtacaaatatatctctgtacctcaattatca
gagcaattcaaaagatttaacattggcctgcagttacaaaacgacctatcactagcatac
aacaaggcctcaagtcaaaaatctgctctagtcttcaaaaaatatttggtcccaaaaaag
gagctcttgaaggcatcttttcaaaaggaactcttaataatgaagagaaattctcccatc
tacattttcaagattatccaaaccaccatcgttgcaataattggtgcaactgtgttcttg
aagactaatatgcatactaataatgaagaagatgggggaatatatgtgggtgctcttctt
tttagcttgatcactaacacctttaatggttttggtgagcttccgatgatcatagagaga
cttcccgtaatttataaacaaagggaccttctttttcacccaccttgggcctttactatt
ccaactttcctgcttggattaccgatatctatcatagattctactgtgtggacagttgtg
acatataatgttatcggtttcgcaccagaagcaactaggttcttgaagcaatggctattg
acatttatgatacaacaaatggctgggggactgttcaggttaattgcctcaatttgcagg
accatgacaatagccaatactggtggtgttcttgttgtcgaattagcattcctagtaggt
ggtttcatcatccctaaaggtcaaattccaaagtggtggggatgggcttattgggtttca
ccgttcagttatggtttcaatgctttcactataaacgaaatgtttgctccaagatggatg
aacaaaatggcttcggacaatgttactgaactaggagtagcagttttgaggacattcgac
gtcactcctgataagaacaggttttggataggagtagctgttcttcttggttttgcagtt
gtgttcaactttctcttcactttgtctctcacctacttaaacccactcggaaaggcacag
gcagtcatatccaaagagaccctaaacgaaaatgcaaaagaaaactcaagtatatcagcc
accaatcccattgattcaacgaggggaattgttcttccatttactccactcatcatgtct
tttagcaacattaattattacgttgatatgcccccagaaatggaagtacaagggatcaaa
gatgacaaacttcagttgcttcaggagatcaccggtgcatttagacctggagttctgaca
gcattaatgggagtaagtggagctgggaaaacaacactaatggatgttttagcaggaaga
aaaacgggcggtttgatccaaggagatattagaatatctggattccccaaaaaacaagaa
acatttgcaagggtttcagggtattgtgagcaaactgatatccactcaccacaagttact
gtctatgaatctcttattttctcagcttttcaacgactccctaaagaagctagcaaagaa
gtaaagctgcattttgtgagtgaaattatggacttagtggagttagacaaccttaaagac
tctattgtagggattgcgggggttaccggtttatccacacaacaaagaaagagactgaca
attgcagtagagcttgttgctaatccttcaatcatatttatggatgaaccaacatccggt
ctcgatgcaagagctgcagccattgttatgagaacaataagaaacaccgttgacacaggg
agaacagtggtttgcacaattcaccagcctagcattgatatttttgaagcttttgacgag
cttctacttctgaaaagagggggacaagtgatatactttggacccttaggacaaaattca
gaaaaaataatcaactactttgaggaaattcctggggtcccaaaactcaaatcacaatat
aatccagcaacatggatgctagaagtgacctcagattcaacagaatctcggcttggaact
gatttctctgaacattatagatcatcacccttgtataaagcaaataatattctagtggaa
caactgagcaagcctacttcaagggcaaaagacctaatcttcaaaacaaagtattcacag
tccacatggggccaattcaagtgttgcataaagaaacaatggtcgagttattggagaacc
cctgattataaccttgttaggtttttctttgcattggttactgctctcctccttgggaca
atcttttggaaagttggcactaaaagggacaacagcactgatttagctactataattggc
gcaatgtatgttgctgtgatgtttgctggatttaacaattgtgtaacaattataccagtt
gcatcccttgaaagaactgtattttatcgagaacaagcagctgggatgtactctgcatta
ccatatgccatggctcaggtaattgtagagataccttttgtgcttgtccaaaccatatat
tatactattatagtatatgccatggtaagcttcgaatggacagtggcaaaattcttttgg
ttcttcttcatcagcttctttacctttttatacttcacgtactatggactcatgattgtg
tctataaccccaaaccatcaagcagcctctatctttgcagctgccatcaatgttctcttc
aatcttttctctggattcttcatcccaagaccgagaatccctaagtggtggatatggtat
tactggatttgccctcttcaatggactattcaaggcctcattatttcacagtatggtgat
ttgaatgaaacaattaatgtgcctgggatgtcatatgacccaacaattcaatggtatgtc
caaaactattttggatatcaagctgatgctttgggatctgttgccaccattttagttgtt
tttactgtcttttttgcgttaatgtatgcatattgcttacataaattgaactttcaaata
agatag
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