Lactuca sativa (garden lettuce): 111920094
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Entry
111920094 CDS
T05352
Name
(RefSeq) DNA topoisomerase 1 alpha
KO
K03163
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
lsv
Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lsv03032
]
111920094
Enzymes [BR:
lsv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
111920094
DNA replication proteins [BR:
lsv03032
]
Eukaryotic type
DNA Topoisomerases
111920094
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Topoisom_I_N
Topoisom_I
Topo_C_assoc
PspA_IM30
DUF896
Motif
Other DBs
NCBI-GeneID:
111920094
NCBI-ProteinID:
XP_023771449
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Position
4:97597084..97602425
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AA seq
828 aa
AA seq
DB search
MNYSSDEDDKPLVFKRSSNSDRLKHSSQQKPTSISKQENPVAKPVAKPVAKPLARPIVKP
PPKQKSDSEDSEDDKPLSSRISVVPNKPNSNHVKITPNPNPNPSSSQHPRPQVKHEDSKD
EKPLSSKFTPKPSIGPFIRKHDDSDDDKPLSSRVNQNGSASRDNQIKKPNLGLNKRPPNE
ERSSSQPLVKKPKLSDSYSPTPIIRKPEVKPEAESSDDDENDHVPISQRIKNQSPSSSKS
ASVKKVMKVTSSSSKTFKKSKKVEKKSKYSKPSKVPPGSGEGQKWTSLVHNGVIFPPPYK
PHGVKILYKGKPVDLTPEQEEVATMFAVMLDTDYMTKPVFKQNFWNDWRKILGRNHTIQS
LDDCDFKPIYDWHQREKEKKKQMTTEEKKAIKEEKMKLEEKYMWAIVDGVKEKVGNFRVE
PPGLFRGRGEHPKMGKLKSRIRPSDITINIGKGAPIPECPIPGESWKEIRHDNTVTWLAY
WNDAINGKDFKYVFLAASSALKGQSDKEKYEKARLLKGYIGGIRQAYTKDFTNKDLTKRQ
VAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVEPQPPNILKFDFLGKDSIRYQNE
VEVEPLVFKAIQQFRTGKKSNEDLFDKLDTSTLNAHLKALMPGLTAKVFRTYNASITLDD
MLNKDMSSGGNLAENVVVYNQANKEVAIICNHQRSVSKSHSAQMMRLNEKIEELKGVVEE
LETDLGRARKGKPPLKGSDGKLKRNMNPEALQKKIAQTNAKIEKMERDKETKEDLKTVAL
GTSKINYLDPRITVAWCKRREVPIEKIFNKSLLAKFAWSMDVDPSFRF
NT seq
2487 nt
NT seq
+upstream
nt +downstream
nt
atgaattattcatctgatgaggatgacaagcccttggttttcaaaaggagctcaaattct
gatagattgaagcattcctctcaacagaaaccaacttccattagtaagcaggagaaccct
gtggctaaacctgttgctaaacctgtggctaaacctttagctagacctattgttaaacct
ccacctaaacaaaagagtgattcagaggattctgaagatgacaaaccattaagttcaaga
atttcagttgtacctaataagccgaattccaaccatgtgaaaataacaccaaaccctaac
cctaaccctagttcatctcaacatccaagaccacaagtgaaacatgaagattctaaggat
gaaaaacctttatcttcaaaatttacacccaagccatcaattggaccatttatcagaaag
catgatgattctgatgatgataagccactatcttcaagagttaaccaaaatggttctgca
tcaagggataatcaaatcaaaaaaccgaatcttggattaaataaaagacccccaaacgag
gaaagatcttcaagtcaaccattggtcaaaaagccaaagctttcagattcttattcaccc
acaccaatcattcggaaaccagaagtgaaaccagaagctgagtcatcagatgatgatgag
aatgatcatgttcccatatctcagagaatcaagaaccaatccccttcaagtagtaaatca
gcatctgtaaaaaaggtgatgaaagttacttcttcatcaagtaaaaccttcaagaagtca
aagaaagtggagaaaaagtcaaaatactccaaaccctcaaaggttccacctggatctggt
gaagggcaaaagtggacaagtttggttcataatggtgtaatttttccacctccatacaag
cctcatggggttaagattctctacaaagggaagcctgttgatttgacacctgaacaagag
gaggtggcaacaatgtttgcagtgatgttagatactgattacatgacaaaacctgtgttc
aaacaaaatttctggaatgattggaggaagatattgggaaggaatcatacaatccagagt
ttagatgattgtgatttcaaaccaatatatgattggcatcaaagggaaaaggaaaagaag
aagcaaatgactacagaagagaaaaaggcgataaaagaagaaaaaatgaaacttgaggag
aaatatatgtgggcaatagttgatggtgttaaagagaaagttggaaactttagggttgag
ccacctgggttgtttagaggtcgtggggagcatccgaagatgggaaagctgaaaagtcgt
atccgtccttctgatatcacaataaatattggcaagggtgcccctatcccggaatgtcca
attcctggtgaaagctggaaagaaattaggcatgataatactgtgacatggttagcatat
tggaatgatgctataaatggaaaggacttcaagtatgtgttcttagctgccagcagtgcc
ctcaagggtcaaagtgacaaagaaaaatacgaaaaggcaaggctgttgaagggatacata
ggaggcatcagacaagcttacactaaagattttacaaataaggatttgacaaagagacag
gtggcagttgccacatatctcattgataaattagcactcagagcaggaaacgagaaggat
gatgatgaagctgatacagttggttgctgcacattgaaagttgaaaatgtcgagccacag
cctccaaatatcctcaagtttgactttcttggtaaagattcaataagataccaaaacgag
gttgaagtcgagccacttgtgttcaaagcaattcaacagttccgaacagggaagaagagt
aatgaagacctttttgacaaacttgatacaagcacattgaatgctcatttaaaagcactc
atgcctggccttacagctaaagtattccgtacatataatgcatccatcaccttggatgat
atgttaaataaggacatgagtagtggtggaaatcttgctgaaaatgtagttgtttacaac
caagcaaacaaagaggtggcaattatttgtaatcatcaacgtagtgtttcaaagtctcat
agtgcacaaatgatgagattgaatgagaaaatagaggaactcaagggggttgtggaagaa
ctggaaactgatttgggtcgtgcaagaaaagggaagcctccattaaagggttcagatggg
aagctaaagaggaacatgaaccctgaagcgttacagaaaaagatcgctcaaactaatgca
aagattgagaaaatggaacgtgacaaagagacaaaagaagatttgaaaacagttgcattg
ggcacttcaaaaatcaattatcttgatcctagaataacagtcgcatggtgtaaacgtcgt
gaagttccaattgaaaagatatttaacaagtctttattggcgaaatttgcgtggtcgatg
gatgtggatccaagcttcaggttctga
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