Lactuca sativa (garden lettuce): 111920122
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Entry
111920122 CDS
T05352
Name
(RefSeq) nuclear pore complex protein NUP93A
KO
K14309
nuclear pore complex protein Nup93
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
111920122
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsv03019
]
111920122
Messenger RNA biogenesis [BR:
lsv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
111920122
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nic96
Motif
Other DBs
NCBI-GeneID:
111920122
NCBI-ProteinID:
XP_023771469
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All DBs
Position
8:126559592..126566106
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AA seq
855 aa
AA seq
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MTSDADMSSWTDLLHSSSKLVEQAAPSAQFPPLQRNLDQLEALSKKLKSKTLRTEAPSQS
IAATRLLAREGINAEQLARDLKSFELKTTFEDVFPAEATSVEEYLQQVREMAMVSAVQEA
QKDNLRNFSDYMMTVLEDDWQKEKRDFLHSLSRISSLPRTNVTDSSIGANRSGPILSLTS
SPHISSGPSNMELLAIADKKAAAYAEVVRNLNDARQRSLEYKPATAFKNAYDNLGLDSSG
GKSVTMNKIWHLIQTLTGENSSVQRNLSKKMSLIIGARRHLEWGHDKYIMEMIHSHPAQA
ALGGVVGNLPKIHAFLRIRLRDYGVLDFDAGDARRQPPVDTTWQQIYFCLRTGYYDDAQR
VASSSRVSHHFASQLTEWISNGGMVSVETASIAAEECEKMLRMGDRSGRGTFDKKKLLLY
ALISGSRRQIDRLLREHPTLFNTIEDFLWFKLCAVRDSPTNSNEGLSPYTLHDLQAYLNK
FEPSYYTKNGKDPLVYPYVLLLSIQLLPAVLYLSKDIGDDGYNIDATHIAIVLADHGVLA
DVTGTGGHKLGVMDGFAESASIIRQYGSLYLRHNNLSMALEYYAQAAAAVGGGKLSWSGR
GNVDQQRQRSLMMQQLLMELLLRDGGILLLLGARGEGEEGELKRFLVDGKERYQFLFEAA
RRCLEAGLNDKSIEIQKRIGAFSAALDTINKSLSEAICSLSRGRLDGESRTAGLVHSGNE
LLETFKYFPNVSLQERELVLEQETVLRQLENILVIHKLARQEHHLDALREIAKLPFLPFD
PRASDTAATDTFQNLSPHVQACIPDLLKVSLQSIDNVRDSDGSLRALRIKIANFLANNLN
RNWPRDLYERVARSL
NT seq
2568 nt
NT seq
+upstream
nt +downstream
nt
atgacgagcgacgcagatatgagtagctggacggatcttctgcattcatcttcgaaactc
gtcgagcaagctgctccttctgctcagtttcctcctctccagagaaatttggatcaatta
gaagcattgtcaaagaagctcaagtcgaaaacgctcagaaccgaggctccctctcaatcg
attgcagctacaaggctacttgcacgtgaggggataaatgctgagcaactggcacgggat
cttaagtcatttgaattgaagacaacttttgaggatgttttccctgccgaagctacaagc
gttgaggaatacttgcagcaggtccgtgaaatggcaatggtttctgctgttcaggaagct
cagaaagataatctcagaaattttagtgactacatgatgacagtgttagaggatgactgg
caaaaggaaaaaagggactttcttcacagcctgagccgcatctccagtttaccaaggacc
aatgtaactgattcaagcattggggctaaccgatcagggccaatactatctttaacttcc
agtcctcacatttcatctggtccttctaacatggagcttttggcaatagctgataaaaag
gctgcagcatatgctgaggttgtgagaaatctcaatgatgcaagacagcgtagtttagaa
tataaaccagctactgcttttaagaatgcatatgacaatcttggcctggattcttctggt
ggtaaatcagttaccatgaacaagatctggcatctaattcagactttgacgggtgagaat
tcaagtgtccaaagaaatctttcaaagaaaatgtcactaataattggtgcaaggcgacac
ctggaatgggggcatgataaatatatcatggaaatgatacacagtcatccagcacaggct
gctcttggtggagtggtgggaaatttgccaaagatccatgcttttcttaggatccggttg
agagactacggggttcttgatttcgatgcaggcgatgctcgtagacagcctcctgttgat
accacatggcagcagatctatttctgcttgagaactgggtactatgatgatgcacaaagg
gttgcttcaagctcccgtgtttctcaccattttgcatcacagcttacagaatggatctca
aacggaggcatggtatcagtagaaaccgcttccattgctgcagaagaatgtgaaaaaatg
ttacgtatgggcgatcgatcaggccgaggaacatttgacaaaaaaaaactacttctctac
gccctcatatccgggtcccgcaggcaaatcgatcgcctactgagagaacaccccacactt
ttcaacaccatagaagacttcctctggttcaaactctgtgctgttcgagactcccccacc
aattcaaacgaaggcttatcaccttacaccttacacgatctacaagcctacttaaacaaa
ttcgaaccatcttactacacaaaaaacgggaaagacccgttggtgtatccgtatgtcttg
ctactaagcatacagttgcttccagctgttttatatctgtctaaagatatcggagacgat
gggtacaacatcgatgctactcatatagcaattgtgctagcagaccatggtgttctcgct
gatgtcactgggacaggtggtcataagttgggtgtgatggatggttttgctgagtcagcg
agtataattagacaatatggttcgttgtatctacgacataacaatctttcgatggcgttg
gagtattacgcgcaggctgctgctgctgttggtggtgggaagttgtcttggtctgggaga
gggaatgtggatcaacaaaggcaacgcagtttgatgatgcagcagttgttgatggagttg
ctgttgcgtgatggtgggatacttttgttgcttggggcaagaggggagggagaagaaggt
gagttaaagaggtttttggttgatggaaaagagaggtaccagtttttgtttgaagctgct
cgcaggtgtctggaagctgggcttaatgacaagtctatagaaattcaaaagagaattggg
gcgttttcagcagcactggatacaataaacaagagtctctctgaagctatctgttcttta
tcacgaggtagactcgatggagagagccgaacagctgggcttgttcattctggaaatgag
ctgctggagacgtttaaatactttccgaatgtcagtctacaagaaagagaacttgtttta
gagcaagaaaccgtgttaagacaacttgagaacattttggttattcataaattggcaagg
caagaacatcatctagatgctttaagggagattgccaagcttccatttcttccatttgat
cccagggcatctgatacagcagcaacagatacttttcaaaatttgtcccctcatgttcaa
gcttgtattccagaccttcttaaggtctctcttcagtctatagacaatgtcagagactca
gatggctcacttcgtgccttgaggatcaagattgccaatttccttgcgaataatttgaat
cgaaactggccacgggacttatacgagagagtagctagaagtctgtga
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