Lactuca sativa (garden lettuce): 111920178
Help
Entry
111920178 CDS
T05352
Name
(RefSeq) RNA pseudouridine synthase 7 isoform X1
KO
K15454
tRNA pseudouridine32 synthase [EC:
5.4.99.28
]
Organism
lsv
Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lsv03016
]
111920178
Enzymes [BR:
lsv01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.28 tRNA pseudouridine32 synthase
111920178
Transfer RNA biogenesis [BR:
lsv03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
111920178
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-GeneID:
111920178
NCBI-ProteinID:
XP_023771545
LinkDB
All DBs
Position
1:36035649..36039391
Genome browser
AA seq
380 aa
AA seq
DB search
MKRNREDMEIVWQTPANPPERHDYIFRNGIRYVKPYYFEFISHAKVRWAGKTIVDLFADE
FKGRNRDYYDSAVKSGRIQVDGKTVSVYYRVQSSQKISHFLHRHEPPVMALDVEILHKGE
DVLTVCKPASVPVHPCGQYRKNTVVGILQAEHDLAPLFPIHRLDRLVSGLLILARSASQA
EIFRQQIEAGMVQKQYVAKVVGEFPEEEQVVNLRVNFNAREGRSTVEPESTDEKVNGKSA
CTKFTRISTNGKYSIVSCHPVTGRTHQIRVHLQSTGHPIANDPLYLSDHIDSNSRRAFTA
HKTAVKSTHSLESKSNDNHISESEHSVEDFDIDPMCTNCPNLAPIGYDGSEEGLWLHCVR
YSGPDWVYECPYPEWASLSL
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgaagaggaacagagaagacatggagattgtctggcaaactccggccaaccctccggag
cgccatgattatatcttccgtaacggcattcgttatgttaagccctactacttcgaattc
atttctcatgctaaggttcggtgggccgggaagaccatcgttgatctgtttgccgacgag
ttcaaaggtcggaaccgtgattactatgattctgctgtaaagtctggccgcatacaggta
gatggaaagacagtgtctgtttattacagagttcaatcatcacaaaagattagtcacttc
ctgcataggcatgaacccccagtgatggcgttggatgttgagattctgcacaaaggagaa
gatgtacttactgtttgtaagcctgcatctgttcccgtacatccatgtggtcaatatcgt
aagaacacagttgttggcattcttcaggcagaacacgacttggcccctctcttccccatt
catcgtctcgatcgtttggtctccggacttcttattcttgccagaagtgcttctcaggct
gaaattttcagacaacagattgaagctggtatggtacaaaaacagtatgttgcaaaagtt
gttggggaatttcctgaggaggagcaagtcgttaatttgagggtaaatttcaatgctcga
gaaggaaggagtacagtagagccagagtccacagatgaaaaagtcaacgggaagtccgca
tgtacaaaatttactagaatctctacaaacgggaaatatagcatcgtatcatgtcatcca
gtcactggaagaactcatcaaattcgtgtgcacctacaatccacgggtcacccgatagcc
aatgacccactctacctctccgatcacattgatagcaactcgagaagagcatttactgcg
cataaaaccgcagtgaagtcgactcattcgttagaatccaagtcaaatgataatcacatc
agtgaatctgaacattccgttgaagattttgacatagatccaatgtgcacaaattgccca
aacttggctcctataggatacgatgggagtgaagaaggtttgtggcttcattgtgttcga
tacagtggacccgattgggtatatgaatgtccatatccagaatgggcatctttaagctta
taa
DBGET
integrated database retrieval system
