Lactuca sativa (garden lettuce): 111920413
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Entry
111920413 CDS
T05352
Name
(RefSeq) importin subunit beta-1
KO
K14293
importin subunit beta-1
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
111920413
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lsv03009
]
111920413
03036 Chromosome and associated proteins [BR:
lsv03036
]
111920413
Ribosome biogenesis [BR:
lsv03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
111920413
Pre-60S particles
111920413
Chromosome and associated proteins [BR:
lsv03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
111920413
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_IMB1
HEAT_EZ
HEAT
IBN_N
HEAT_GCN1
TPR_IPO5
Vac14_Fab1_bd
TPR_DNAAF5
HEAT_Maestro
MMS19_C
PDS5
INTS7_N
HEAT_GCN1_C_2
Xpo1
ARM_ARMC5
DUF577
Motif
Other DBs
NCBI-GeneID:
111920413
NCBI-ProteinID:
XP_023771764
LinkDB
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Position
9:complement(66215074..66219566)
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AA seq
872 aa
AA seq
DB search
MALEVTQILLNAQAVDGSVRKHAEESLKQFQEQNLPGFLLSLSGELAHDEKPVDSRKLAG
LILKNALDAKEQHRKYELIQRWLSLDVGVKSQIKTYLLQTLTSPVHEARSTASQVIAKVA
GIELPQKQWPELIGSLLSNIHQVPVHVKQATLETLGYLCEEVSPDVVEQDHVNKILTAVV
QGMNASEASNDVRLAATRALYNALGFAQANFTNEMERDYIMRVVCEATLSPEVKIRQAAF
ECLVSISSSYYEKLAPYIQDIFNITAKAVKEDEEPVALQAIEFWSSICDEEIDILEEYGG
DFTTADSDIPCFYFIKQALPALVPMLLETLLKQEEDQDQDEGAWNLAMAGGTCLGLVART
VGNDIVPLVMPFIEENITKPDWRQREGATYAFGSILEGPSPNQLTPLVNVALNFMLTALT
KDPSNHVKDTTAWTLGRIFEFLHGSTMDTPIITPSNCQQIITVLLQSMKDAPNVAEKACG
ALYFLAQGFEDVGPSSPLTPFFQEIVQSLLTVTHREDANESRLRTAAYETLNEVVRCSTD
ETIPMVLQLVPVIMMELHQTLEEQKLSSDEREKQNELQGLLCGCLQVIIQKLGASDATRY
PFMQYTDQIMNLFLRVFASRSATVHEEAMLAIGALAYATGPDFAKFMPDFYKYLEMGLQN
FEEYQVCAVTVGVVGDICRALEEKVLPWCDGIMTQLLKDLSSNQLHRSVKPPIFSCFGDI
SLAIGENFEKYLMYAMPMLQSAAELSSHTSGADDEMIEYTNLLRNGILEAYSGIFQGFKN
SPKTQLLIPYAPHILQFLDLMYMEKDMDEVVMKTAIGVLGDLADTLGSNAGSLIQQSLSS
KDFLNECLSSDDHMIKESAEWAKLAISRAISV
NT seq
2619 nt
NT seq
+upstream
nt +downstream
nt
atggcattggaagttacccaaattctgttgaatgcacaagctgttgatggatctgttcgg
aagcatgctgaagagagtttaaagcaatttcaggagcaaaatctacctggatttctgtta
tctctctctggagaacttgctcatgatgagaagcctgttgatagccgtaaactagctggt
ttgattctcaagaatgctttagatgcaaaagagcaacatagaaagtatgaactcatccaa
agatggttatcacttgatgtgggtgttaaatcacaaatcaagacatacctattacagaca
ctcacctctcctgttcatgaggcaagatcaactgcatcacaagttatagctaaagttgct
ggaatagagcttccacaaaaacaatggcctgagctcattggctcccttctatccaacatt
caccaagtccctgttcatgtcaagcaagccactttagaaactctcgggtatttatgtgaa
gaagtttctccagatgttgtagaacaagatcatgtgaataaaatcctcacagctgttgtt
caaggcatgaatgcaagtgaagctagtaatgatgtacgacttgctgcaactagagcactt
tacaatgctcttggttttgctcaagcaaatttcaccaatgaaatggaacgcgattatatt
atgagagttgtttgtgaagcaactttatctccagaagtaaagattcgccaagcagctttt
gagtgtttggtttccatctcatccagctactatgagaaactagctccttacattcaagat
atcttcaacatcactgctaaagctgttaaagaagacgaagagccagtggctttacaagca
attgaattctggagttcaatttgtgatgaagagattgatattttggaagaatatggaggc
gacttcactactgctgactcagacattccttgtttttacttcataaaacaggctctccct
gcgcttgtgcccatgttgctagagactttgttgaagcaagaagaagatcaagatcaagat
gaaggtgcttggaatcttgcaatggcaggaggaacctgtcttggtttagttgcaagaaca
gtaggaaacgatattgtcccacttgtgatgcctttcattgaagaaaacataacaaaacca
gattggagacaaagggaaggagctacttatgcttttggatccatcttagaaggtccttca
cccaatcagttgactcctttagtcaatgttgctctaaacttcatgctcacagctttgacc
aaagaccccagcaaccatgtaaaagacaccacagcctggacactcggaagaatatttgaa
tttcttcatggatccaccatggatacacccattattactccctcaaattgccaacagatc
attactgttcttctccaaagcatgaaggatgctccaaatgtagctgaaaaagcttgtggg
gccctgtactttctcgcacagggttttgaagatgtgggtccctcgtctcccttgactcca
tttttccaggaaattgttcagtctcttttgactgtgacccacagagaagatgctaacgag
tctagattgagaaccgctgcttatgaaacattaaatgaagttgtgagatgctctacagat
gaaacaattcccatggtgttgcagttagtccctgtcatcatgatggagctacaccagact
ttagaagaacagaaactctcttctgatgaaagagagaaacagaatgagttgcagggtctt
ctgtgtgggtgtttgcaggtgatcattcaaaaactcggagcatcagatgcaacaagatac
cccttcatgcaatacacagatcaaatcatgaatctttttcttagggttttcgcctcccga
agtgccacggttcatgaagaagcaatgcttgcaattggagctttggcatacgcaacgggt
cccgattttgcaaaattcatgcctgatttttataaatatttggaaatgggacttcagaat
tttgaagagtatcaggtgtgtgctgtgactgtaggtgtggtgggtgatatttgcagggct
ttggaggaaaaggtgttgccttggtgtgatgggattatgactcagcttcttaaagatttg
tcaagcaaccagttgcatcgatccgtgaagcctccgattttttcttgttttggtgatatt
tcgcttgcgattggagagaattttgagaagtatttgatgtatgccatgcctatgctccag
agtgcagctgagttgtcttcacacacttcaggtgctgatgatgagatgatcgagtacaca
aatctcttgagaaatgggattttggaggcgtattccgggatttttcagggttttaaaaac
tctcctaaaactcagctgctgattccttatgctcctcatatcctccagtttcttgatctg
atgtatatggagaaagacatggatgaagtcgtgatgaaaacagcaatcggtgttcttgga
gatttagcagatactcttggaagcaacgcaggatcattgattcaacagtctctttcaagc
aaagattttctgaatgaatgtttgtcttcagatgatcatatgattaaggagtctgctgaa
tgggccaagctcgcaatctctcgtgcaatttccgtttaa
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