Lactuca sativa (garden lettuce): 111920417
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Entry
111920417 CDS
T05352
Name
(RefSeq) RNA-binding KH domain-containing protein RCF3
KO
K21444
poly(rC)-binding protein 3/4
Organism
lsv
Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsv03019
]
111920417
Messenger RNA biogenesis [BR:
lsv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
111920417
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH_KhpA-B
Motif
Other DBs
NCBI-GeneID:
111920417
NCBI-ProteinID:
XP_023771768
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All DBs
Position
9:66349912..66353014
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AA seq
677 aa
AA seq
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MMDRSRSKRYYYDQDYDHMETLPRTKQRYNNNYSGGHHYGPNNHHQRRNIGGGGGGGGGG
GGSGGGRKPQDPSSLMVTTSYRILCHDAKAGSVIGKSGSIIKAIRQHTGAWINVHELMPG
DEERIIEISDTRRRDPDGRMPSFSPAQEALLLIHERILESDGGGYSLGYGGGDDDEDMYS
SRLGVNRLVTRLVVSRMHVGCLLGKGGKIIEQMRMETKTHIRVLPRDHTIPRCVEMSEEI
VQVVGEMSSVKNAVEIISSRLRESQHRDRSHFHGRLQSPDRFFPEDDFMHHPNNMPRRLP
MEGPNNYGSRLPNNGRNFNHASRPSSYVNDTGASPLSDNAQSLYAEDLVFRILCPNNKVD
SVVGQSDGFMELLQNEIGVDVKVADLVVGSDEQIIIISSEEGPDDELFPAQEALLHIQTR
ILDLVPEKDNIITTRLLLSSGEIGCLDGRDGFLSETKKMTGADIQILPRENLPQFVSVND
ELVQIVGEIKAAREALVEVTLRLRSYIFQGFFQKDASQVPPFLAPSPGGSASNLEAASSN
NTTPRENYSGNDPTTASNQNLQTLTLKSTGGSNNETVNQTESGNREDTPSTVNRIAVPLV
TRSILEVVIPEYAVPKLITKSRNKLAQISELSGANVKLIDTSPEATEHIIQISGTPEQAE
RAQSLLQGFILSTQEDL
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atgatggatagatcaagatctaagaggtactattacgatcaggactatgaccacatggag
actctacccagaacaaagcagcggtacaataacaactacagcggcggccatcattacggt
cctaacaaccatcaccagcgacggaacatcggtggtggcggtggtggtggaggtggtggt
ggtggtagtggtggaggccggaaaccccaagatccttcatctcttatggtcactacgagc
taccggatcttgtgtcatgatgctaaagctggaagtgtgatcgggaagtccgggagcata
atcaaggccataaggcaacataccggggcttggattaacgtccacgagctgatgccggga
gatgaggagagaatcatcgagatctctgatacgcggaggagggatcctgatgggagaatg
ccttcgttttcccctgctcaggaagctctgcttttgatacatgagaggattttggagagt
gatggaggtgggtacagtttagggtacggcggaggtgatgacgatgaggatatgtatagc
tctcggctgggtgtcaacaggctggtaacaagactggttgtctccaggatgcatgtaggt
tgtttgcttgggaaaggagggaagattatcgaacaaatgaggatggaaaccaaaactcac
attagggttctacctagagaccacacaattccacgatgtgttgaaatgtctgaagaaatt
gttcaggttgttggtgagatgagctcagtgaagaatgcagtagaaattatttcttcacga
ttaagggagagtcagcatcgtgatcgaagccattttcatggccggctacaatcacctgac
agattctttcctgaagatgattttatgcatcatccaaataacatgccacgtaggctacca
atggaaggacctaataactatggatcacgtttgcccaacaatggcagaaactttaatcat
gcgtcacgtccatctagctatgttaatgatactggagctagtcctctatctgacaatgct
caatccctttatgcagaagatcttgtatttcgtatactttgtccaaacaataaagttgat
agtgttgtaggccaatcagatggatttatggaattactccagaatgaaattggtgttgat
gtcaaagttgctgatcttgtggtcggatcagatgaacaaatcatcatcatctcttcagaa
gagggccctgatgatgagctatttcctgctcaagaagctcttttgcacattcagacacga
attcttgatcttgttcctgaaaaagacaacattatcacaacgcgtcttctactttcatct
ggtgaaattggatgtttagatggaagagatggatttttatctgagacaaagaaaatgact
ggtgcagacattcagattctacccagggaaaatctcccacaatttgtatcagttaatgat
gaacttgtacagattgttggagagatcaaggctgctagagaagctcttgtggaggtgaca
ttgagactaaggagttatatatttcaagggttttttcaaaaggatgcatcacaagttcct
ccctttcttgcacctagccctgggggtagtgcttcaaacttggaagcagcttctagcaat
aacacaactcctcgtgaaaattattccggaaatgaccctaccactgcatccaaccaaaat
ctgcaaactctaacactaaagagtactggtggatctaacaatgaaactgtaaatcaaacc
gaaagtggaaaccgtgaagatacaccatctacagtaaacagaattgctgtaccactagtt
acaaggagtattctggaagttgtgataccagaatatgcagttcccaagctcataacaaag
tcaagaaataagcttgctcagattagtgaactttcgggagccaatgtgaaactgattgat
acaagtccagaagcaacagaacatattatccaaatatctggtacccctgagcaagctgaa
agagcccaaagtttgctacaaggatttattttgagcacccaagaagacctataa
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