KEGG   Lactuca sativa (garden lettuce): 111920643
Entry
111920643         CDS       T05352                                 
Name
(RefSeq) cyclin-T1-3 isoform X1
  KO
K15188  cyclin T
Organism
lsv  Lactuca sativa (garden lettuce)
Pathway
lsv03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:lsv00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    111920643
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:lsv03021]
    111920643
Transcription machinery [BR:lsv03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     111920643
    Brd4/P-TEFb complex
     111920643
    7SK RNP complex
     111920643
SSDB
Motif
Pfam: Cyclin_N CycT2-like_C Cyclin_C TFIIB Cyclin_C_2
Other DBs
NCBI-GeneID: 111920643
NCBI-ProteinID: XP_023771983
LinkDB
Position
5:63406318..63408965
AA seq 397 aa
MHIYEAPMQCYISQKEIAKDATVIHISETPHLNRNWYFSRKEIEHNTPSRSDGIDYKQEQ
HLRKLYCSFLQELGIELKVPQVTIATSMMFCHRFYMRQSHKKNDWQTVATVCMFLACKAE
ETPRWLGELAVVAYKLIYKWDPSASRRIREIYDKQKDLILIGERLLLITIAFDLNIEHPY
KSLVAALKRLAITDKELVKIAWNFVNDWLRTSLCLHHKPHYIAAGSLFLAAKVKNVKLPT
AKGKAWWMEFDVSPKQLEGVIQQMMSLWEQSQSQTVSEISKSTTKSNYVKKQVFENSYDT
INCVDKTSDTGSGVSDCEPVAIKSDSSSSCKIVSVEGMSTGGNNSQVDVDRIREKIKKRN
SIKTMKRKRVEEDMDGDEWIERELEDGIVLESPIPGN
NT seq 1194 nt   +upstreamnt  +downstreamnt
atgcatatatatgaagctccaatgcagtgttatatttcccaaaaagaaattgcaaaagat
gcaactgtaattcacatatctgaaacacctcatcttaatcgcaattggtatttcagcaga
aaagagatagaacacaatactccatcaagatctgatggcattgattacaaacaagagcaa
catctgagaaagctatactgctcttttcttcaagagcttggcatagagcttaaagtacct
caggtaacaatagctacatcaatgatgttttgtcatcgattttacatgcgacaatcccat
aaaaagaatgattggcagacagttgcaactgtatgcatgtttcttgcatgcaaagctgaa
gaaacaccaaggtggttaggtgaacttgctgtggttgcttataagttaatatacaaatgg
gatccttcagcctcaaggagaattcgggagatatatgataagcaaaaggatctaatttta
attggggaaagacttctgttaattactattgcctttgatctaaatatagagcatccatac
aagtcacttgttgctgctcttaagagattagctattacagacaaagagcttgtaaaaatc
gcatggaattttgtcaatgattggcttcgtacctcgctttgtttgcatcacaaaccccat
tacatagctgctggctctctatttcttgctgccaaggttaaaaatgtaaaattgccaaca
gcaaaagggaaggcttggtggatggagtttgatgtttcaccaaaacagttagaaggtgtg
atccaacaaatgatgagtttatgggaacagagtcaaagtcaaactgtatctgaaatcagc
aaatcaacaacaaaatctaattatgttaaaaaacaggtttttgagaattcctatgatacg
ataaattgtgtcgataaaacaagtgatacaggtagtggagttagtgattgtgaacctgtt
gctataaagtctgattcaagttcaagttgtaagatagtttcagtagagggtatgagtaca
ggtggcaataatagccaggtggatgtggatcgaatcagagaaaaaatcaagaaaagaaat
tctataaaaactatgaaaagaaaacgtgtggaagaagacatggatggtgatgaatggata
gaaagggaattggaggatggaattgtattggaatcaccgattccagggaattag

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