Lactuca sativa (garden lettuce): 111920703
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Entry
111920703 CDS
T05352
Name
(RefSeq) vacuolar protein-sorting-associated protein 33 homolog
KO
K20182
vacuolar protein sorting-associated protein 33A
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
111920703
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lsv04131
]
111920703
Membrane trafficking [BR:
lsv04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
111920703
Hops complex
111920703
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sec1
DUF2067
Motif
Other DBs
NCBI-GeneID:
111920703
NCBI-ProteinID:
XP_023772040
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Position
9:complement(102616666..102624146)
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AA seq
595 aa
AA seq
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MAQIPNLQNGPINLTPIRDQSQKELITILKNIRGKKCLVIDQKLGGSLSLIVQTSVLKEH
GAELLYLNEDPLETTCTKVVYLVQTQLHLMKFISSHIHNDNSKGLQREYFLYFVPRRGVA
CEKLLEDEKVHNLLTIGEFPLYAVPIDEDILSFELDSSYKECVTDGDTTSLWHIAKAIHK
LEFSFGLIPNVRAKGKASVRVADMLNRLQAEEPVSSTDTGVPEINTIIILDRELDMVTPM
CTQLTYEGLLDEFLHINNGAVEIDASIMGANQQDGKKMKVPLNSTDKLFRETRDLNFEVV
VQVLRQKATSMKQDYTEMQTTNQTVSELKDFVKKLNSLPEMTRHINLAQHLSTLTSKPSF
LGRLDMEHTIVEAESYDICLDYIEEMIHKQEPLVSVLRQLILLSVTNAGLPKRNFDYIRR
EILHSYGFEHIATLNNLEKAGLVKKQEGKSNWLLIKRALNLVVEDTDTTNPKDVSYVFSG
YAPLSIRLIQHAIRSGWRPLEEILKLLPGTHTESKRSAFANGTLDTLPGGSHMDKVQDGR
RSLVLVVFVGGVTFAEISALRFLSSQEGMAYDIIIGTTKIINGNTLTETFLEKLG
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atggctcaaattcccaatttacagaacggacctatcaatttgactcctataagagatcag
tctcagaaagagctcataacaatcctaaaaaatattcgaggtaaaaagtgtttggtcatc
gatcagaaactaggtggttccctgtcattgatcgtccagacttcggtcctcaaggaacat
ggggctgaactcctttatcttaatgaagatccactcgagactacctgtacaaaagtggtt
taccttgtacaaactcagcttcatttgatgaaatttatttcttcacatatccacaatgac
aactcaaaagggcttcaaagagagtattttctctattttgttcctcgtaggggtgttgca
tgtgagaaacttcttgaggatgaaaaagttcataatctattaactattggggagttccca
ttgtatgctgttccaattgatgaggatatattatcgtttgaactcgattcatcttataaa
gaatgtgtaacagatggtgatacaacctctctttggcatattgccaaagccatccacaag
cttgagttctcttttggtttgataccaaatgttagggcaaaagggaaagcatctgtacgt
gttgctgacatgcttaatcgtctgcaagctgaagagcctgttagctcaactgatacaggt
gtccctgagataaataccattatcattctggacagagagttggatatggtgactcctatg
tgtactcaattgacatatgaagggcttctggacgagtttctacacatcaataatggtgct
gtggagatagatgcatcaatcatgggtgctaaccaacaagatgggaaaaagatgaaggtt
cctcttaattcaactgacaagctgttcagggagactcgggatcttaactttgaagttgtt
gtccaggttttaagacaaaaagcaacatccatgaagcaagactacacggagatgcaaact
actaatcagacagtttctgagttgaaagattttgtcaaaaagctcaactcattgccagaa
atgactaggcacattaatcttgctcaacatttatccacacttacttcaaaaccttcgttt
cttgggcgacttgatatggaacacacgattgtggaggctgagagttatgacatatgtttg
gattacattgaagagatgattcataagcaggagcctcttgttagtgtccttagacagctt
atcttactttcagttaccaatgctgggttaccaaaaagaaactttgactatattaggaga
gagattcttcacagctatggatttgagcatatagctacgcttaataatttagaaaaagct
gggttggttaagaaacaggagggaaaaagcaactggttgttaatcaaacgagctcttaac
cttgtggttgaagatactgatacaaccaatcccaaagacgtgtcatatgttttctctgga
tatgctcctctcagtattcgactgatccaacatgcaattcgatctggatggcgtcccctt
gaagaaatattaaagctgttgcctggcacacatacagagtcgaaaaggagtgcatttgca
aatggtacacttgatacactaccagggggttcacacatggacaaagtacaagatgggagg
cgatctcttgttctagttgtctttgttggaggggtaacatttgcagagatttctgcactt
cgctttctcagctctcaggaagggatggcatacgatattattatagggacaacaaagatc
ataaatggtaataccttgaccgaaactttcttggagaagttgggttga
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