Lactuca sativa (garden lettuce): 111920821
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Entry
111920821 CDS
T05352
Name
(RefSeq) cytoplasmic tRNA 2-thiolation protein 1
KO
K14168
cytoplasmic tRNA 2-thiolation protein 1 [EC:2.7.7.-]
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
111920821
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lsv03016
]
111920821
Transfer RNA biogenesis [BR:
lsv03016
]
Eukaryotic type
tRNA modification factors
Thiolation factors
111920821
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Gene cluster
GFIT
Motif
Pfam:
zn-ribbon_14
ATP_bind_3
ThiI
tRNA_Me_trans
CTU2
DUF7573
Motif
Other DBs
NCBI-GeneID:
111920821
NCBI-ProteinID:
XP_023772157
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All DBs
Position
3:10084770..10087692
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AA seq
351 aa
AA seq
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MDGAHGGEKTKSRLCSICNQRRPALKRPKTLQQICRECFYVVFEEEIHSVIVNNKLFKPG
ERIAIGASGGKDSTVLAYVMSELNRRHNYGLDLFLLSVDEGITGYRDDSLETVKRNEIQY
GLPLKVVSYKDLYGWTMDEIVKMIGLKNNCTFCGVFRRQALDRGAALLKVDKLVTGHNAD
DIAETVLLNILRGDIARLSRCTSIITGEDGPIPRCKPFKYTYEKEIVMYAYFKKLDYFST
ECIYSPNAYRGFAREFIKDLERIRPRAILDIIKSGEDFRIATSTKMPEQGTCQRCGYISS
QKWCKACVLLEGLNRGLPKLGIGRTRGVNRKDDQHNDAKNIQSKPCGSLDF
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atggacggagcccacggcggcgagaagaccaaaagccgcttgtgcagcatctgcaaccaa
cggaggcctgctctcaaacgtcctaaaactcttcaacaaatttgcagagaatgcttctat
gtggtatttgaggaagagattcatagtgtgattgtgaacaacaaactgtttaagccagga
gagcgcatcgccataggagcttctggtggaaaagactccacagttcttgcatatgtaatg
tcagaattaaaccgtcgccacaactatggcttggatctcttcctcttatcagttgatgaa
gggatcacaggctacagggatgactcacttgaaactgttaaaagaaatgagatccagtat
ggtctgccactcaaagttgtttcctataaggatctatatggatggacaatggatgagatt
gtgaagatgattggtcttaagaacaattgcacattttgtggtgtttttcgtcgccaggct
cttgatcgtggtgctgccttgttaaaagtggacaagctagttactgggcataatgctgat
gatattgctgaaacagttctgttgaatattttgcgaggtgatattgctagattaagcaga
tgcacatctataatcactggtgaagatggaccaattcctagatgcaagccatttaaatac
acatatgagaaggaaatcgttatgtatgcatacttcaagaaactggactacttttcaacc
gagtgcatatattcaccaaatgcttatcgtggatttgctcgagagttcattaaagatcta
gagagaatcagaccccgagccatacttgacatcatcaaatcaggcgaagatttcaggatc
gccacatctacaaaaatgccggagcagggaacttgtcaacgctgtggatatatttctagc
cagaaatggtgtaaagcttgtgttttgctggaggggcttaatcggggtttgccaaagctg
gggattgggagaacccgaggtgtgaaccgaaaagatgatcaacacaatgatgccaagaat
atacagagcaaaccatgtggaagtcttgatttttaa
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