Lactuca sativa (garden lettuce): 111920944
Help
Entry
111920944 CDS
T05352
Name
(RefSeq) protein argonaute 1
KO
K11593
eukaryotic translation initiation factor 2C
Organism
lsv
Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsv03019
]
111920944
03036 Chromosome and associated proteins [BR:
lsv03036
]
111920944
Messenger RNA biogenesis [BR:
lsv03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
111920944
Chromosome and associated proteins [BR:
lsv03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
111920944
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
111920944
microRNA pathway
RISC loading complex
111920944
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
Gly-rich_Ago1
Motif
Other DBs
NCBI-GeneID:
111920944
NCBI-ProteinID:
XP_023772276
LinkDB
All DBs
Position
8:complement(2417371..2423085)
Genome browser
AA seq
1053 aa
AA seq
DB search
MVRKRRTEQPSAGESSEPQVASAGRGTVAQRPPPQQQQPQQPQPQPQGGYQGRGRGGQGA
QGGQPQGGRGWGPRGGGSTVGGPQRGGMTPQQYPTGPVQQSPRGTAPFQGGGGDVHGGSG
SGPSKAPTPELHQATQVPQQAESSVGSSSNQPVDEAAAQLKQLSVQQQQQQEVAVQAAPA
SSKSMRFPLRPGKGSSGTRCIVKANHFFAELPDKDLHQYDVTITPEVTSRGVNRAVMAQL
VKLYKDSHLGKRLPAYDGRKSLYTAGPLPFISKDFKITLLDEDDGSGSARRERDFKVAIK
LASRADLHHLDMFLQGRQADAPQEALQVLDIVLRELPTNRYTPVGRSFYHPALGRRQPLG
EGLESWRGFYQSIRPTQMGLSLNIDMSSTAFIEPLPVIDFVTQLLNRDVSARPLSDSDRV
KIKKALRGVKVEVTHRGNMRRKYRISGLTSQATRELNFPVDERGTMKSVVEYFRETYGFV
IQHIQWPCLQVGNTQRPNYLPMEVCKIVEGQRYSKRLNERQITALLKVTCQRPHEREEDI
LKTVAHNAYDKDPYAQEFGIKISRNLASVEARILPPPWLKYHDTGREKDCLPQVGQWNMM
NKKMVNGGRVASWICINFARNVQDNTARGFCHELAQMCNISGMAFNPEPVLPAFSGRPDQ
VERVLKARFHDAMTKLQPQKRELDLLIVILPDNNGSLYGDLKRICETDLGVVSQCCLTKH
VFKMSKQYLANVALKINVKVGGRNTVLLDAISRRIPNVSDVPTIIFGADVTHPHPGEDSS
PSIAAVVASQDWPEITKYAGLVCAQAHRQELIQDLYKEWHDPQRGKMSGGMVKELLISFR
RATGQKPKRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEPDYQPPVTFVVVQKRHHTR
LFANNHRDRNATDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDEN
KFAADALQSLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPDTSDSGSMTSGRG
AGTRSTRVPGANVAAVRPLPALKENVKRVMFYC
NT seq
3162 nt
NT seq
+upstream
nt +downstream
nt
atggtgaggaagaggagaactgaacaacccagcgcaggagagagttctgagcctcaggta
gccagtgctggacgaggcactgttgctcaacgtcctccaccacagcagcagcaaccacaa
cagccacaaccacaaccacaaggtggctatcaaggaagagggcgaggtggccaaggagca
cagggtggacaaccacaaggaggaagggggtggggtccaaggggaggagggtccactgtt
ggtggaccacaacgtggtggcatgactccccaacagtatcctaccggaccagttcagcag
agtccaagaggaactgcaccatttcaaggtggtggaggcgatgttcatggtggttctggt
tctggaccttctaaggcaccaactcccgagctgcaccaagcaacacaggtcccccagcaa
gcagagtcttctgtggggtcatcaagtaatcagcctgtggatgaggcagcagctcagctt
aaacagctgtctgtgcagcagcagcagcagcaagaggtggctgttcaggctgcacctgct
tccagcaagtcaatgaggtttcctttacgtcctggaaaaggtagctctggaacaaggtgc
attgttaaggccaaccacttttttgctgaactgcctgacaaggatttacaccagtatgat
gttactatcacacctgaagtgacatcccgtggtgtgaatcgggctgtgatggcacagttg
gtgaaactgtacaaagactctcatcttgggaagcgcctacctgcttatgatggaagaaag
agtctttatactgcaggccctcttccttttatctctaaagatttcaaaatcactctgctt
gatgaagatgatggatcaggcagtgccagaagagagagggacttcaaggttgcaatcaag
ttggcttcacgtgccgacttgcatcacttagacatgtttttacaaggaaggcaggctgat
gctccacaagaagctcttcaggtgctagatattgttcttcgtgagctgcctactaatcgg
tacacaccagtgggtcgatcattctatcaccctgctcttggtcgaaggcaaccattgggt
gaagggcttgaaagttggcgtggtttctaccagagtatacgccctactcagatggggctg
tccctcaatatcgacatgtcctcgactgccttcattgagccacttcctgtgattgacttt
gtcactcagctcctgaacagggatgtttcagcaagaccattatctgactctgaccgggtg
aagataaaaaaagcactaagaggagtcaaggtggaagtaacgcaccgaggaaatatgcgc
aggaagtatcgtatatctggtttaacatctcaagcaacacgggagcttaattttccagtg
gatgagagaggtacaatgaaatctgtggtggaatacttccgtgagacatatggatttgtg
atccaacacattcagtggccatgcctgcaagttggaaacactcagagacccaactatttg
cctatggaggtgtgcaagattgtagagggtcagaggtattcaaagaggctaaatgagaga
caaattactgccttacttaaagtgacatgtcagcgccctcatgagagagaggaggatatc
ctaaagacggtcgctcacaatgcttatgacaaggatccatacgcccaggaatttgggata
aaaattagtcggaatcttgcctctgttgaagctaggattttgccacctccttggctcaag
taccatgacacaggccgtgaaaaggactgtctgcctcaagtaggtcaatggaatatgatg
aacaagaaaatggttaatggaggaagagtcgcaagctggatctgcataaattttgcccgc
aatgtgcaagataatactgcccgtggtttctgtcatgagcttgcccaaatgtgtaatatt
tctggcatggcattcaatcctgaacctgtgcttccagcatttagtgggcgtcctgatcag
gtggagagagtgctgaaggctcgtttccatgatgccatgactaagcttcaacctcagaaa
agggagcttgatctgctcattgtcattctgccagacaacaatggatccctctatggtgac
ctgaaacgaatctgtgagactgatcttggcgttgtttctcagtgctgtctgactaaacat
gtttttaagatgagcaaacagtaccttgcaaacgtggctttgaagattaacgtgaaggtt
ggaggaaggaacacggtccttctggatgcaatttcaaggcggatacctaatgtcagcgat
gtaccaactatcatctttggtgctgatgtcacccatccacaccccggggaagattcaagc
ccctctattgcagctgttgttgcctctcaagactggcctgagataacaaagtatgctggg
ttggtttgtgcacaagcccaccgtcaagaactgatccaggatctgtacaaggagtggcat
gacccacaaagaggcaaaatgtctggtggcatggtcaaggaactgctgatatctttccgc
agagcaactgggcagaagccaaagcggattattttttacagggatggagtgagcgagggg
cagttctatcaagttttactttatgagcttgatgcgattcgaaaggcatgtgcatcgttg
gagccagattatcagcctccagtgacatttgtggtggttcaaaaacgtcatcacacgcga
ttgtttgctaacaaccatcgtgaccgcaatgctaccgacaggagtgggaatatactgcca
ggcaccgttgtcgactccaagatatgtcatccaaccgagtttgatttctatctatgcagc
catgctgggattcaagggacaagccgtccggcccattaccatgtgctgtgggatgagaac
aagttcgcagctgatgctttgcaatcactcacaaacaatctctgttacacgtatgcaagg
tgcactcgttctgtgtccattgtgccacctgcatactatgctcatctggctgccttccgt
gcacggttctatatggagccagacacatctgacagtggctccatgacaagcggccgtggt
gcagggacaaggagcacccgtgtgccaggggcaaatgttgctgcggtcagacccctacct
gctctcaaggagaatgtcaagcgggttatgttctactgctag
DBGET
integrated database retrieval system
