Lactuca sativa (garden lettuce): 111921053
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Entry
111921053 CDS
T05352
Name
(RefSeq) DNA repair protein RAD51 homolog 4 isoform X1
KO
K10871
RAD51-like protein 3
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
111921053
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lsv03400
]
111921053
DNA repair and recombination proteins [BR:
lsv03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecA family proteins
111921053
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rad51
RecA
ATPase
AAA_25
DnaB_C
ATPase_2
AAA_22
Elong_Iki1
AAA_24
ABC_tran
CobU
CbiA
Motif
Other DBs
NCBI-GeneID:
111921053
NCBI-ProteinID:
XP_023772409
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Position
5:complement(338982779..338987098)
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AA seq
317 aa
AA seq
DB search
MGALKSLEEVYHIIDANFLQFCASRGIFSVEDFLVHDVSMLMASADKLSNSDRLKQGINQ
LVLITETYHQPWMNGLMLLEDREQNKHYISTGSESFDVLLQGGLREGHVTELVGPSSSGK
TQVCFQVASNVALKKGNVVFFDSGNSFSPTRIKQMVTHISGSEENKVNGGVEEAMRHIEC
HAVFDIYTLLDLLHQLKLNLKSQSQKKSTELIIIDSISSLIAPILGGSNAQGHALMVSLG
YLLKDLSHQHNIAVLVTNHMVSGEGGSLKPALGESWRNIPHVQLQLSQHHTTTNIYGVYI
LRHPYMASGKSVNFMIP
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgggtgcattgaaatctctggaggaggtctatcacataatcgacgccaactttcttcaa
ttctgtgcatctcgcggcattttttccgttgaagatttcttagttcatgatgtgtccatg
ttgatggcttctgcagacaaactctctaattcagatagattaaaacagggtatcaaccaa
cttgtcttgattactgaaacctaccatcaaccatggatgaatggtttgatgttattggaa
gatagagaacagaataaacattatatatcaacaggatctgaaagctttgatgtgttactc
caaggtggattgcgtgagggacatgtaacagagctagtgggcccatcatcatctggaaaa
acacaagtttgctttcaagttgcttcaaatgtggctttgaagaagggtaatgtcgtcttt
tttgactcgggaaactcgttttctcctacacggattaaacaaatggttacccatatatct
ggttcagaggagaataaggtgaatggaggtgttgaagaagcaatgagacacatagaatgc
catgcggtatttgacatatataccctgctagaccttcttcatcaactaaagttaaattta
aaatctcaatctcagaaaaagtcaacagagctgataatcattgattcaatatcatcactc
attgctccaattctaggaggcagtaatgctcaaggacatgcattaatggtttctcttgga
taccttctcaaggacttatcacaccaacacaacatcgcagttttagttacaaatcatatg
gttagtggagaaggaggtagtttgaagcctgctcttggagagagttggagaaatattcca
catgtgcagctacaactttctcaacaccatacaacaaccaacatctatggtgtctatata
cttaggcatccttacatggcatctggcaaaagtgtgaatttcatgattccatga
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